Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00153 ATGGGGGGCAACTTGGTCATTGCATACATTATTTTATCCTTGTATTCTCTCTTCATTATTGTGCATGGCACTGATAATAAGTTATCATGCAATCAAACTCCATATCCCAGTCTTTGTAACCATTACATTATTGGCACTACCAATTATTCAATTTCCTCTTCTTATTATTCCTTCCATGACATGGCCCTTAAGGTCACCATGGACCAAGCAATAGTAGCACACAAACTTGTCTCATCAACCATGGAATCCAACCATTTCAAAGACAAGAGAGCCAAGTCCGCATGGGAAGATTGTTTGGAACTCTATGAGAATACAATCTATCAGCTCAACCGTTCAATGAGCTCAAACAATCTAAACGACAGGTTAACATGGCAAAGTGCTTCTATTGCCAATCAACAAACATGCCAAAACGGTTTTCTTGATTCTAACCTTTCATCTCACTACCTAAACTACTTTCCATCCATTTCAACCAACTTATCCAACTTGCTCAGCAACTCTTTGGCCATTACCAATACATTAACGTCCTTCACTTCGTTACCAAAACACCCGGTTGCTCGCGGCGGTCGAAAATTGCTTTCTTTTAATGGCTTCCCAGAGTGGCTATCTCCTTCCGACAGGAGGCTTCTTCAGGATTTGCCGGGAACGGCGGCACCGAAGGCGGACATTGTGGTGGCACAGGACGGGAGTGGGAATTACAAGAGTGTTTCGGAGGGCGTGGCGGCGGCCGGTAGGGTGAATAAGAATGGTCGAGTGGTTGTGTACGTGAAAGCTGGCGTTTACCGAGAGAGTGTGAACATAAAGGGAGGTATAAAAAATTTGATGATGTTTGGGGATGGTATTGGAGCTACCATTATTACGGGTAGCAAGAATTATGAAGATGGCTCCACCACTGTTGGTTCAGCTACTTTTAGTAAGTACATACCTTATATTGATATGGTGGTGAAGAGTAGCCTGGACGGTTTGATTGAAGCGGCAGGGTGGATGCCATGGGCGGGAAGCTTTGCCTTGAATACATTGTATTATGGAGAGTATATGAATATTGGAGCTGGTGCTAACACTGCAGGGAGGGTTAAATGGCCTGGCTTTCATGTTATTACCAACCCTTCTGAGGCTTTGAAATTTACTGTTGCTAATTTCTTGGATGGTGGATCCTGGATTCCTGGCACTGGTGTTCCCTTTGAAACTGGCCTTTGA 1194 0.4397 MGGNLVIAYIILSLYSLFIIVHGTDNKLSCNQTPYPSLCNHYIIGTTNYSISSSYYSFHDMALKVTMDQAIVAHKLVSSTMESNHFKDKRAKSAWEDCLELYENTIYQLNRSMSSNNLNDRLTWQSASIANQQTCQNGFLDSNLSSHYLNYFPSISTNLSNLLSNSLAITNTLTSFTSLPKHPVARGGRKLLSFNGFPEWLSPSDRRLLQDLPGTAAPKADIVVAQDGSGNYKSVSEGVAAAGRVNKNGRVVVYVKAGVYRESVNIKGGIKNLMMFGDGIGATIITGSKNYEDGSTTVGSATFSKYIPYIDMVVKSSLDGLIEAAGWMPWAGSFALNTLYYGEYMNIGAGANTAGRVKWPGFHVITNPSEALKFTVANFLDGGSWIPGTGVPFETGL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00153 397 SMART PMEI_2 21 169 IPR006501 GO:0004857
Arst1g00153 397 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 174 IPR035513 -
Arst1g00153 397 NCBIfam pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Arst1g00153 397 CDD PMEI-like_3 28 145 - -
Arst1g00153 397 Gene3D - 311 397 IPR012334 -
Arst1g00153 397 SUPERFAMILY Pectin lyase-like 313 395 IPR011050 -
Arst1g00153 397 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 174 IPR035513 -
Arst1g00153 397 SUPERFAMILY Pectin lyase-like 215 304 IPR011050 -
Arst1g00153 397 Pfam Plant invertase/pectin methylesterase inhibitor 29 169 IPR006501 GO:0004857
Arst1g00153 397 Gene3D - 215 310 IPR012334 -
Arst1g00153 397 PANTHER PECTINESTERASE 313 387 - -
Arst1g00153 397 Pfam Pectinesterase 221 304 IPR000070 GO:0030599|GO:0042545
Arst1g00153 397 Pfam Pectinesterase 312 382 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00153 Arst-Chr1 1294339 1295813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00153 312 397 Carbohydrate Esterase AT1G23200 62.791 2.97e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00153 - - adu:107486344 762.681