Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00152 ATGTCAGCCACAGCACCTGAGGCCCGTCAATGGCACTGGGAGAATGCTGCTGCCGGTGGCACAGCTGGGTTTGCCACTGTCGCTGTCATGCATCCCCTCGATGTTGTCCGCACTAGGTTCCAAGTTAATGATGGCAGAGTCTCTCATGTTCCCAATTATAAGAATACTGTTCATGCAATTTTCACCATTGCTCGATCTGAGGGATTAAGAGGATTATATGCAGGTTTTCTTCCTGGGGTTATTGGGTCGACTATTTCATGGGGCCTATATTTCTTTTTTTATGATAAAGCCAAACAAAGATATGCTAGGAATAGGGAGGATACACTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTGTGCTTGTGCACAAATCCTGTTTGGCTGGTAAAAACAAGATTGCAGCTTCAGACTCCTCTTCATCAAACACGACCATACTATGGGATTTTTGATGCATTTAGGACCATAATGAGGGAAGAAGGTTTTAGAGCACTCTACAGAGGAATTGTTCCTGGTCTATTTCTGCAGGTCTCTCATGGGGCTGTTCAGTTCACAGCATATGAGGAGCTTCGTAAAGTTATTGTAGACATAAAGCACAGGGGAAGTAAAAGGCATCTTCAAAACCCGGATGATCTGTTGAATTCTGCTGATTATGCTGTTCTTGGGGCAACATCAAAAATTGCTGCAATACTTCTAACCTATCCATTTCAGGTTATGAGATCTCGATTGCAGCAACGGCCTAGTGCGGATGGGGTTCCAAGATATGTGGATAGTTGGCATGTTGTGAAGGAAACTGCAAGATATGAAGGTGTCCGAGGATTTTACAGGGGAATAACCCCAAGCCTTTTGAAAAATGTTCCTGCTTCTTCAGTAACATTTATTGTTTATGAAAATGTTCTTAAATTGCTTAAACTAGCAAGGAGGAATGACTAA 948 0.4357 MSATAPEARQWHWENAAAGGTAGFATVAVMHPLDVVRTRFQVNDGRVSHVPNYKNTVHAIFTIARSEGLRGLYAGFLPGVIGSTISWGLYFFFYDKAKQRYARNREDTLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQTPLHQTRPYYGIFDAFRTIMREEGFRALYRGIVPGLFLQVSHGAVQFTAYEELRKVIVDIKHRGSKRHLQNPDDLLNSADYAVLGATSKIAAILLTYPFQVMRSRLQQRPSADGVPRYVDSWHVVKETARYEGVRGFYRGITPSLLKNVPASSVTFIVYENVLKLLKLARRND 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00152 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 311 IPR044712 GO:0006862|GO:0055085
Arst1g00152 315 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Arst1g00152 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Arst1g00152 315 FunFam Folate transporter 1, chloroplastic 106 313 - -
Arst1g00152 315 Pfam Mitochondrial carrier protein 222 309 IPR018108 -
Arst1g00152 315 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Arst1g00152 315 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Arst1g00152 315 Gene3D Mitochondrial carrier domain 2 104 IPR023395 -
Arst1g00152 315 PRINTS Mitochondrial carrier protein signature 75 95 IPR002067 GO:0055085
Arst1g00152 315 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Arst1g00152 315 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Arst1g00152 315 PRINTS Mitochondrial carrier protein signature 171 189 IPR002067 GO:0055085
Arst1g00152 315 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Arst1g00152 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Arst1g00152 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 307 IPR018108 -
Arst1g00152 315 Gene3D Mitochondrial carrier domain 105 314 IPR023395 -
Arst1g00152 315 SUPERFAMILY Mitochondrial carrier 13 303 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00152 Arst-Chr1 1273075 1280836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00152 32 308 Chloroplast and Mitochondria Gene Families AT2G47490 38.710 2.10e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00152 K15115 - gmx:100809599 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00152 1 1273075 1280836 Arst1g00152 1 1273075 1280836 ECH