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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Arst1g00129
ATGATGAATCATTGTTGCAGTAACAGCAACTCTCAGGATCACGTGATGGGCACGTGTAAATGCGGCATGCTCCCCACGCCCTATGGAGATGACTATTATTACGGTGACCCAAACAGGTACTCCTTTACACCTTCTTCGTCGTCTTTGTCTTGGTCGTCGGTGGACTGTACCCTCTCCCTGGGGACACCGTCCACGCGATTCTCCGAAGACGAAGACAGGCGAACACGTCATCATCATGAACGTCGCTCCAAACAGAATCCTCATCATTCTGAGGCTAAAGCCAGCAAGGAATCCGACGGTGATGCTTTCTTTTCTCGCCGCTGTGCCAACTGTGATACCACTTCCACACCTCTATGGAGGAACGGTCCTCGGGGACCCAAGACACTATGCAATGCATGCGGGATTAGATACAAGAAAGAAGAGAGAAGAGCCAGCGCTACTGCAGCCGCCACCACAACCACCGTTACTAACAGCGGCGGCGAAATGGAGCCGGTTACGGCTCACATGTACGGCCACAACAATAACAATTCGTGGTACTATACAAACTCTCAAGGCAATAATAATGGCGAGTTACGTTTCATGGATTATGATGCCAATGATGACATGGACCCATTCCCTTCTTGGAGACTCAACAATGCAGACAGAACAAATCTTGTTCACGACTTTACAAGATGA
675
0.4948
MMNHCCSNSNSQDHVMGTCKCGMLPTPYGDDYYYGDPNRYSFTPSSSSLSWSSVDCTLSLGTPSTRFSEDEDRRTRHHHERRSKQNPHHSEAKASKESDGDAFFSRRCANCDTTSTPLWRNGPRGPKTLCNACGIRYKKEERRASATAAATTTTVTNSGGEMEPVTAHMYGHNNNNSWYYTNSQGNNNGELRFMDYDANDDMDPFPSWRLNNADRTNLVHDFTR
224
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Arst1g00129
224
ProSitePatterns
GATA-type zinc finger domain.
108
133
IPR000679
GO:0006355|GO:0043565
Arst1g00129
224
Gene3D
-
104
169
IPR013088
GO:0006355|GO:0008270
Arst1g00129
224
SMART
GATA_3
102
154
IPR000679
GO:0006355|GO:0043565
Arst1g00129
224
Pfam
GATA zinc finger
108
142
IPR000679
GO:0006355|GO:0043565
Arst1g00129
224
ProSiteProfiles
GATA-type zinc finger domain profile.
105
138
IPR000679
GO:0006355|GO:0043565
Arst1g00129
224
MobiDBLite
consensus disorder prediction
63
99
-
-
Arst1g00129
224
PANTHER
GATA TRANSCRIPTION FACTOR 18
16
224
IPR044272
GO:0003700|GO:0009908
Arst1g00129
224
MobiDBLite
consensus disorder prediction
85
99
-
-
Arst1g00129
224
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
104
146
-
-
Arst1g00129
224
CDD
ZnF_GATA
107
139
IPR000679
GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Arst1g00129
Arst-Chr1
1136294
1138537
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Arst1g00129
50
224
C2C2-Gata Transcription Factor Family
AT3G50870
41.667
1.49e-41
141
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Arst1g00129
GATA
9e-18
CL0167
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Arst1g00129
-
-
aip:107616717
418.698
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Arst1g00129
1
1136294
1138537
Arst1g00129
1
1136294
1138537
ECH
Arst5g01008
5
9823108
9824794
Arst1g00129
1
1136294
1138537
PCT
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