Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00094 ATGGGGGGCAACTTGGTCATTGCATACATTATTTTATCCTTGTATTCTCTCTTCATTATTGTGCATGGCACTGATAATAAGTTATCATGCAATCAAACTCCATATCCCAGTCTTTGTAACCATTACATTATTGGCACTACCAATTATTCAATTTCCTCTTCTTATTATTCCTTCCATGACATGGCCCTTAAGGTCACCATGGACCAAGCAATAGTAGCACACAAACTTGTCTCATCAACCATGGAATCCAACCATTTCAAAGACAAGAGAGCCAAGTCCGCATGGGAAGATTGTTTGGAACTCTATGAGAATACAATCTATCAGCTCAACCGTTCAATGAGCTCAAACAATCTAAACGACAGGTTAACATGGCAAAGTGCTTCTATTGCCAATCAACAAACATGCCAAAACGGTTTTCTTGATTCTAACCTTTCATCTCACTACCTAAACTACTTTCCATCCATTTCAACCAACTTATCCAACTTGCTCAGCAACTCTTTGGCCATTACCAATACATTAACGTCCTTCACTTCGTTACCAAAACACCCGGTTGCTCGCGGCGGTCGAAAATTGCTTTCTTTTAATGGCTTCCCAGAGTGGCTATCTCCTTCCGACAGGAGGCTTCTTCAGGATTTGCCGGGAACGGCGGCACCGAAGGCGGACATTGTGGTGGCACAGGACGGGAGTGGGAATTACAAGAGTGTTTCGGAGGGCGTGGGTTCCTTTGATTCAGCGGTGTCAAGTGATGGGTTCATCGCCAGGGACTTAACAATTGAGAACAGTGCTGGGCCACAGAAGCACCAAGCGGTGGCACTTCTTTCCAGCTCCGATCACTCCGTCTTCTACCGCTGTAGCTTCAGAGGCTACCAAGACACCTTATACGTCCTTTCCCAACGCCAATTCTACCGCGACTGCGACATCTACGGCACCATTGACTTCATCTTCGGTGACGCCGTCGCCCTCTTCCAAAACTGCAACATCTTCTTGAGAAAACCAATGACTAAGCAACAGAACGCAGTCACAGCACAAGGGAGAACCGATCCCAACGAGAACACCGGCATTGTCATCCACAACTGCCGCATCATGGCGGCTTCAGATCTGAAGCCAGTTCAGGGATCTGTGAAGTGCTTCCTCGGGCGGCCGTGGCAGAAGTACTCAAGAACGGTGGTGGTGAAGAGTAGCCTGGACGGTTTGATTGAAGCGGCAGGGTGGATGCCATGGGCGGGAAGCTTTGCCTTGAATACATTGTATTATGGAGAGTATATGAATATTGGAGCTGGTGCTAACACTGCAGGGAGGGTTAAATGGCCTGGCTTTCATGTTATTACCAACCCTTCTGAGGCTTTGAAATTTACTGTTGCTAATTTCTTGGATGGTGGATCCTGGATTCCTGGCACTGGTGTTCCCTTTGAAACTGGCCTTTGA 1425 0.4702 MGGNLVIAYIILSLYSLFIIVHGTDNKLSCNQTPYPSLCNHYIIGTTNYSISSSYYSFHDMALKVTMDQAIVAHKLVSSTMESNHFKDKRAKSAWEDCLELYENTIYQLNRSMSSNNLNDRLTWQSASIANQQTCQNGFLDSNLSSHYLNYFPSISTNLSNLLSNSLAITNTLTSFTSLPKHPVARGGRKLLSFNGFPEWLSPSDRRLLQDLPGTAAPKADIVVAQDGSGNYKSVSEGVGSFDSAVSSDGFIARDLTIENSAGPQKHQAVALLSSSDHSVFYRCSFRGYQDTLYVLSQRQFYRDCDIYGTIDFIFGDAVALFQNCNIFLRKPMTKQQNAVTAQGRTDPNENTGIVIHNCRIMAASDLKPVQGSVKCFLGRPWQKYSRTVVVKSSLDGLIEAAGWMPWAGSFALNTLYYGEYMNIGAGANTAGRVKWPGFHVITNPSEALKFTVANFLDGGSWIPGTGVPFETGL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00094 474 SMART PMEI_2 21 169 IPR006501 GO:0004857
Arst1g00094 474 Pfam Plant invertase/pectin methylesterase inhibitor 29 169 IPR006501 GO:0004857
Arst1g00094 474 Pfam Pectinesterase 245 459 IPR000070 GO:0030599|GO:0042545
Arst1g00094 474 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 174 IPR035513 -
Arst1g00094 474 ProSitePatterns Pectinesterase signature 2. 307 316 IPR033131 -
Arst1g00094 474 CDD PMEI-like_3 28 145 - -
Arst1g00094 474 Gene3D - 238 474 IPR012334 -
Arst1g00094 474 SUPERFAMILY Pectin lyase-like 215 472 IPR011050 -
Arst1g00094 474 PANTHER PECTINESTERASE 14 239 - -
Arst1g00094 474 FunFam Pectinesterase 4 240 474 - -
Arst1g00094 474 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 174 IPR035513 -
Arst1g00094 474 NCBIfam pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00094 Arst-Chr1 975730 977706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00094 8 474 Carbohydrate Esterase AT2G45220 44.633 6.46e-147 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00094 - - aip:107646806 860.136