Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00093 ATGGGAATAGCAACACCGCCACCAATTCCTTCCATTCTCTCTCACTCAAAGACTAATAACTACCAGCAGCACCATTCTTTCACCATAATCGAGAAGCCTGAAGAAGAAGAAGAAGAAGGATTAAACGCTTCTAATTCTATGTCCCAAGATTACCACCACCACAATCAAGGAATCTTCACCTTCTCCAATAATGGGTTCGAGAGATCCACACAGGTAACAAACCAAGAACACCATCACCAACATCAACACCACTTGGCTCAGCAAATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGATCCACAGCAACCGCCTCCGGCACAGCCACCAACAGCCATAATTGGAATAGAAGAATCCGGAGGCATCCCGGGGTACGAAACTGCCGGGATGCTATCGGAGATGTTCAATTTCCCGCCGGTTGTAGATGCTGCGGCCGGGGAATTATTGGAGCAGCCAATGATAGCGACGTTTCGTTCCCCAACGACGACGAGGTCATTGGGTAGCGATTGGTATGGTGGAAACAGACAAGGGATGATAACCGGGTTGGGAGCGTTGGGAGATAATTCAAAGAATAATCATAATCAACATGATCAAAGTAATTTGAACAACGGTGGTGTCATAGTTCATCATCAACATGATAATCAGATTCCTAGCATTAATGCCGATTCAGCTGCAGCCATGCAACTTTTCCTCATGAACCCACAAACCACAACCAGATCACCTTCCCCTCCGTCCCATCACACCACACCCACTCCTCCTTCGTCTTCTTCGACGCTTCACATGCTTCTTCCTAATCCTAATCCCAATACTTCCCTACAAGGCTTCCATGGTGGTGGTGGTGGTACCTTCAACCAAATCACATGGGCCCCTGACAGTGCTCAAGAAGCTCAAGGCCTCTCTTTATCCTTATCCTCTTCGTTACAGCACCTGGAAGCCGCGAAAGCCGAGGAATTGAGGATGGGAGAAAGTGGTTTCCTCTTTTACAACCAAGGAGTTGGTGGTGGTCCTTCATCTTCCTCTTCTTCTGCTCAGTATCCTTACAAGAATCTCCCTGGCCATCACCAACAACACCAAGCATTGCATATTCAAGGACCCATTGGGTTTGGATCATCATCTTCGTCTTTGGGTCTAGTCAACGTCCTCAGGAATTCCAAGTATGTCAAGGCCGCTCAGGAGTTGCTTGAAGAGTTCTGCAGCGTTGGGAGGGGTCAGTTCAAGAAAAACAAGTTCACTAGGCAGCTCTCAAACCCTAGCTCCAATCAAGGTGGCGCCGCCGCCGCTTCTTCATCTTCTTCAAAGGAACTGCCTCCTTTGTCAGCTTCTGATAGGATCGAGCATCAAAGGCGGAAGGTCAAGCTTCTCACCATGCTTGATGAGGTGGACCGTAGGTACAGTCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTCGACCTGGTGATGGGGTACGGGGCGGCGGTACCGTACACGGCGCTGGCGCAGAAGGCGATGTCGCGGCACTTCCGGTGCCTGAAGGATGCAATAACGACGCAGTTGAAACACAGCTGCGAGGTACTTGGAGAGAAGGAAGGGGTGGGGACGACGGGGCTGACGAAGGGGGAGACGCCGCGGCTGAAGATGCTGGAGCAGAGCTTGAGGCAGCAGAGGGCGTTCCACCAAATGGGGATGATAGAGCAGGAGGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTCTTCGAGCATTTTCTTCACCCGTACCCAAGCGATGCAGATAAGCATCTCTTAGCAAGACAGACTGGGTTATCAAGAAATCAGGTGTCAAACTGGTTTATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTTGAAGACATGTACCAACAAGAACTCAAAGAAGCAGAGAGTACAATAGCAGAAGAAGAAGACGACAATGAAGGAGAAAGCAACAACAATAGTGGCAATCATGTACAAACGCCACTACCACCATCATCAACAACTACAACACCACCACCACTTCAATTATCATCGTCAACACCAACAAGTAATAATAACAACAATGTTAATAAAAGATCAGATATTATCATCAATGCTCAAGATAGTAACCCTTCATTAGCAGCAATTAATAGACAAGGCTTAGAAATTCAAGCAAAGCAGCCTGCTACAAGTTCCACCGCCATCACCACCGTCACCCCACCTGTAGTGTCACAGTGTTTTGACTCAGAGCACCTACTAAATGAGGATACGTGTGGCCATGGAAGCATAGTGAGTGCAGAATATGGAACCCCTTCTGGTGTTGCTGCAATGACTGAGATAGGGTCTTCTTCAAGTACTCTCATCAGGTTTGGGACTACAGCTGCACCCGGCGACGTGTCACTCACGCTAGGGCTACGACACACTGGGAACAACTCCTTTCTCCATTAG 2430 0.4885 MGIATPPPIPSILSHSKTNNYQQHHSFTIIEKPEEEEEEGLNASNSMSQDYHHHNQGIFTFSNNGFERSTQVTNQEHHHQHQHHLAQQIRRDKVRVQGFDPQQPPPAQPPTAIIGIEESGGIPGYETAGMLSEMFNFPPVVDAAAGELLEQPMIATFRSPTTTRSLGSDWYGGNRQGMITGLGALGDNSKNNHNQHDQSNLNNGGVIVHHQHDNQIPSINADSAAAMQLFLMNPQTTTRSPSPPSHHTTPTPPSSSSTLHMLLPNPNPNTSLQGFHGGGGGTFNQITWAPDSAQEAQGLSLSLSSSLQHLEAAKAEELRMGESGFLFYNQGVGGGPSSSSSSAQYPYKNLPGHHQQHQALHIQGPIGFGSSSSSLGLVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFTRQLSNPSSNQGGAAAASSSSSKELPPLSASDRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNSFDLVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCEVLGEKEGVGTTGLTKGETPRLKMLEQSLRQQRAFHQMGMIEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAESTIAEEEDDNEGESNNNSGNHVQTPLPPSSTTTTPPPLQLSSSTPTSNNNNNVNKRSDIIINAQDSNPSLAAINRQGLEIQAKQPATSSTAITTVTPPVVSQCFDSEHLLNEDTCGHGSIVSAEYGTPSGVAAMTEIGSSSSTLIRFGTTAAPGDVSLTLGLRHTGNNSFLH 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00093 809 CDD homeodomain 563 624 IPR001356 GO:0003677
Arst1g00093 809 ProSiteProfiles 'Homeobox' domain profile. 560 623 IPR001356 GO:0003677
Arst1g00093 809 Pfam Homeobox KN domain 580 619 IPR008422 GO:0003677|GO:0006355
Arst1g00093 809 MobiDBLite consensus disorder prediction 251 278 - -
Arst1g00093 809 MobiDBLite consensus disorder prediction 637 691 - -
Arst1g00093 809 SMART prehox3 375 511 IPR006563 -
Arst1g00093 809 MobiDBLite consensus disorder prediction 72 97 - -
Arst1g00093 809 SUPERFAMILY Homeodomain-like 565 630 IPR009057 -
Arst1g00093 809 SMART HOX_1 563 627 IPR001356 GO:0003677
Arst1g00093 809 MobiDBLite consensus disorder prediction 70 120 - -
Arst1g00093 809 Pfam Associated with HOX 380 510 IPR006563 -
Arst1g00093 809 MobiDBLite consensus disorder prediction 235 278 - -
Arst1g00093 809 MobiDBLite consensus disorder prediction 672 691 - -
Arst1g00093 809 MobiDBLite consensus disorder prediction 1 23 - -
Arst1g00093 809 FunFam BEL1-like homeodomain protein 4 566 628 - -
Arst1g00093 809 MobiDBLite consensus disorder prediction 412 442 - -
Arst1g00093 809 Coils Coil 626 653 - -
Arst1g00093 809 Gene3D - 566 628 - -
Arst1g00093 809 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 258 652 - -
Arst1g00093 809 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00093 Arst-Chr1 929832 942584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00093 44 610 Homeobox Transcription Factor Family AT4G36870 48.558 4.54e-141 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst1g00093 POX 4.6e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00093 - - tcc:18611010 801.971