Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00091 ATGGGTTGGTTTACCAAGTTGCTTAAGGGATCCAACCATAAATCTTCGAGAGGAAAATATCATGGGAAACATGATAATTCCATGGATGATTTGACAGATGTTGAGAGAGAAGAAATTGATCGTGCAATTGCGCTCTCTCTTTCGGAGGAAGATCCGAAAGGGAAAAAAGTAATTGAGGACGACCCTCAATCTTCTGATGATGAACAACTCTGTGAACTTACTGATGAAGATGAATATCATGGTGAAGTTGAACAACATGAAGAATTAAGTAATCATCACAAAGAGGAAGATGAATCTGTTGGTGAAGTTGAGGAAGAGGAAGATGACCATCTTAATAACATTCAACAGGATAATGACAAGCATCTTGCAGAAGCGCAGCTTGAGGAAGATGAACAACTTGCCAGAGCACTTCAAGAAAGTTTGAACATTGATTCAGACAGAGCTGAAAGAGATTCTTTATTTCAACCATTTCCACACCTCCTTCGACCTGTATACAGAACCTGTGCTGGCTGCAATTCAGAGATTGGCCATGGCAGATTTTTGAGTTGCATGGGAGGTGTCTGGCATCCAGAATGTTTCTGTTGCCATGCTTGTAATTTGCCAATCACTGATTATGAGTTTTCCATGTCTGGAAATCGTCGTTACCATAAATCTTGCTACAAGGAGCTGCATCACCCAAGATGTGATGTTTGCAAGAACTTCATCCCACCAAATTCAGCTGGACTCATTGAGTATAGAGCACATCCTTTCTGGATGCAGAAATACTGTCCTTCACATGAGCGTGATGGAACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGTCAAGGGATACAAAGTATCTTTTGCTCGATGACGGTCGAAAGTTGTGCCTAGAGTGTCTAGACTCGGCTATTATGGATACGCATGAATGCCAGCCTCTCTATCTTGAAATACAAGAATTCTATGAAGGTTTAAATATGAAAATAGAACAGCAAGTTCCAATGCTTTTAGTTGAGAGACAAGCACTCAACGAGGCCATGGAGGGAGAAAAGAATGTAAAAATATTTACTATATGCCAGATTTTAAGGAGACCAAGGATAGGGGCAGGATACCGAGTCATAGATATGATAACTGAGCCTTACAGGCTAATCCGCCATTGCGAAGTGACAGCCATACTTGTTTTGTATGGCCTTCCTAGGTTATTGACGGGTTCAATCCTGGCCCATGAGATGATGCATGCTTGGCTTAGGCTTAAAGGCTATGGCAATTTAAGGCCAGAAGTTGAAGAAGGAATTTGCCAAGTGCTAGCTCACATGTGGCTAGATTCAGAGATCTATGCTGGTTCAGGAAGTGATAGTGCATCATCGTCCTCGGCCTCATCCTCATCCTCATCCTCGCCTTCCTCTTCTACATCATCAAAGAAGGGTAAACGGTCTGACTTCGAGAAGAAACTTGGCGAGTTTTTCAAACACCAGATTGAGTCCGATCGCTCATCGGCTTATGGAGATGGATTCAGAGAGGGGAACCAAGCTGTGCTCAAGTATGGTTTAAGAAGTACCCTTGATCATATTCGACTAACCGGAAGTTTTCCATACTGA 1578 0.4246 MGWFTKLLKGSNHKSSRGKYHGKHDNSMDDLTDVEREEIDRAIALSLSEEDPKGKKVIEDDPQSSDDEQLCELTDEDEYHGEVEQHEELSNHHKEEDESVGEVEEEEDDHLNNIQQDNDKHLAEAQLEEDEQLARALQESLNIDSDRAERDSLFQPFPHLLRPVYRTCAGCNSEIGHGRFLSCMGGVWHPECFCCHACNLPITDYEFSMSGNRRYHKSCYKELHHPRCDVCKNFIPPNSAGLIEYRAHPFWMQKYCPSHERDGTPRCCSCERMESRDTKYLLLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKIEQQVPMLLVERQALNEAMEGEKNVKIFTICQILRRPRIGAGYRVIDMITEPYRLIRHCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYGNLRPEVEEGICQVLAHMWLDSEIYAGSGSDSASSSSASSSSSSSPSSSTSSKKGKRSDFEKKLGEFFKHQIESDRSSAYGDGFREGNQAVLKYGLRSTLDHIRLTGSFPY 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00091 525 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 128 147 IPR003903 -
Arst1g00091 525 ProSitePatterns LIM zinc-binding domain signature. 168 202 IPR001781 -
Arst1g00091 525 MobiDBLite consensus disorder prediction 79 99 - -
Arst1g00091 525 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 253 - -
Arst1g00091 525 SMART uim 34 53 IPR003903 -
Arst1g00091 525 SMART uim 128 147 IPR003903 -
Arst1g00091 525 FunFam Protein DA1-related 1 162 221 - -
Arst1g00091 525 Coils Coil 111 140 - -
Arst1g00091 525 Gene3D Cysteine Rich Protein 164 225 - -
Arst1g00091 525 PANTHER PROTEIN DA1-RELATED 2 3 525 IPR045218 -
Arst1g00091 525 MobiDBLite consensus disorder prediction 449 471 - -
Arst1g00091 525 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 164 193 - -
Arst1g00091 525 SMART lim_4 167 219 IPR001781 -
Arst1g00091 525 ProSiteProfiles LIM domain profile. 166 226 IPR001781 -
Arst1g00091 525 MobiDBLite consensus disorder prediction 21 63 - -
Arst1g00091 525 CDD LIM_DA1 168 220 - -
Arst1g00091 525 MobiDBLite consensus disorder prediction 1 109 - -
Arst1g00091 525 Pfam LIM domain 168 222 IPR001781 -
Arst1g00091 525 Pfam Protein DA1 317 520 IPR022087 -
Arst1g00091 525 MobiDBLite consensus disorder prediction 449 467 - -
Arst1g00091 525 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00091 Arst-Chr1 917714 924481 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst1g00091 DA1-like 2.2e-87 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00091 - - gmx:100806605 812.757