Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00088 ATGGACCATGCCGAATTAACCACCGACCAGGTTCTGAGGAGGGACATTCCATGGGAGACGTACATGTCTACCAAGCTCATCTCTGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCACCGATCAGAGAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCGGCTTATGTTCGCGTGTTTGTTCATGTCTTGCGTGATATTTTCAAAGAAGATACTGTAGAATATGTTTTGGCTCTAATTGATGAGATGCTGGCTGCGAACCCGAAAAGAGCAAGATTGTTTCATGATAGCTCCCTTTCAGATGAAGATACCTATGAGCCTTTCTTAAGGTTGCTTTGGAAAGGAAACTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTGATAGTTAGTGCCAGGCCTAAAAATCAGAATGGTGTTGTTTCAAATGGAGATACATCAAAGAAACCCTTCACCACTATTGATGATGTTTTGAGAGCATTGGTAAAATGGCTTTGTGAACAGCTCAAGAAGCCATCTCATCCCAATCGTGGAGTCCCAACTGCTGTCAATTGCTTAGCAACTCTGCTTAAGGAACATCTGGTTAGGTCTTCCTTTGTTCAAGCAGATGGAGTGAAGTTGCTTGTGCCATTGATTTCACCAGCATCCACCCAACAATCTATTCAGATTCTGTATGAAGCATGTCTCTGCATATGGCTGCTATCCTATTATGATCCGGCAATTGAATATTTGGCTACTTCGAGGGCCCTTCCACGACTTATTGACGTTGTTAAGACTTCTACAAAAGAGAAGGTAGTTAGAGTAGTGGTCTTGACTCTTAGAAACTTGCTGTCAAAAGGGAGTTTGGGTGCTCAGATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAGTTTAAAAGCTCAAGCTTGGAGTGATGAGGACCTGCTGGAGGCATTGAATTCTCTTGAAGAAGGGCTAAAAGATAACATTAAGAAACTTAGTTCTTTTGATAAGTACAAGCAAGAAGTCCTGCTTGGTCATCTGGATTGGTCCCCGATGCACAAAGATCCATTGTTTTGGCGAGAAAATATTAATCACTTTGAAGAAAATGACTTCCAGATTCTAAGGGTCCTAGTTACAATTCTTGATACGTCTAGTGATCCAAGAACTCTGGCTGTTGCTTGCTTTGACATTTCACAGTTCATCCAGCACCATCCTTCTGGCCGGATCATTGTGGCGGACCTTAAAGCCAAGGAACGAGTAATGAAACTAATGAATCATGAGAATACCGAGGTTACTAAAAATGCACTGCTCTGCATCCAACGGCTTTTCTTAGGGGCAAAGTATGCAAGCTTTTTGCAAGCCTAG 1353 0.4272 MDHAELTTDQVLRRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRVFVHVLRDIFKEDTVEYVLALIDEMLAANPKRARLFHDSSLSDEDTYEPFLRLLWKGNWFIQEKSCKILALIVSARPKNQNGVVSNGDTSKKPFTTIDDVLRALVKWLCEQLKKPSHPNRGVPTAVNCLATLLKEHLVRSSFVQADGVKLLVPLISPASTQQSIQILYEACLCIWLLSYYDPAIEYLATSRALPRLIDVVKTSTKEKVVRVVVLTLRNLLSKGSLGAQMVDFQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDPLFWRENINHFEENDFQILRVLVTILDTSSDPRTLAVACFDISQFIQHHPSGRIIVADLKAKERVMKLMNHENTEVTKNALLCIQRLFLGAKYASFLQA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00088 450 Pfam V-ATPase subunit H 3 321 IPR004908 GO:0000221|GO:0046961|GO:1902600
Arst1g00088 450 SUPERFAMILY ARM repeat 7 440 IPR016024 -
Arst1g00088 450 Gene3D - 2 329 IPR011989 -
Arst1g00088 450 Pfam V-ATPase subunit H 327 439 IPR011987 GO:0000221|GO:1902600
Arst1g00088 450 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 449 IPR004908 GO:0000221|GO:0046961|GO:1902600
Arst1g00088 450 PIRSF V-ATP_synth_H 1 449 IPR004908 GO:0000221|GO:0046961|GO:1902600
Arst1g00088 450 Gene3D - 341 442 IPR038497 -
Arst1g00088 450 SMART arm_5 400 440 IPR000225 GO:0005515
Arst1g00088 450 SMART arm_5 239 280 IPR000225 GO:0005515
Arst1g00088 450 SMART arm_5 193 238 IPR000225 GO:0005515
Arst1g00088 450 FunFam V-type proton ATPase subunit H 341 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00088 Arst-Chr1 904023 911507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00088 1 450 Primary Pumps ATPases(2) AT3G42050 78.667 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00088 K02144 - gmx:100796479 795.423