Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00071 ATGTTTCATTTCCATACAAACCTTTCTATTCTCCTCCTTCTCACAACAATCTTGGTGTTGTTCAACACAACAAGAGGCAAGAACCACAATAACTGCAACCGTAGTTGCGGAGAATATTCCTTGCCGTACCCTTTTGGTTTCTCCGATGATTGTGAAATCAAACTTAACTGCACCACCACCAACAGAAACAAGAGAGTCCAAATTGGAAATCTGCAAGTCCAGAACGTAACATCTGAAAGCATATTCATCACTCTCCCGGCCGAATGCAACCGGGGAAAGGATTTTATAGAACCCCTCTTCGGAGAAAACTATGGTCCAACATGGAACAACAGCTTCCTCGTACAAGGCTGTGAACACGAGCTTGGAGGCTGCAATATCCCAATAGCTAGTTTCGTTGGGAGCCAGAGTGAGATTAAAGGGTGTGATAGAAGAAGTGAAAACATTAGTTGCTTCACAAAACCGCCGCAACAAAAGGAACGTGCCGATGTTGTGAGTGTTACGGATTGGCGAGGAATTGGGTGTAGGTCGTTGTTTTCTGCTTTTGCTTTTGATAAGAGTAAAGAGGTATCGCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTGAAGGGTCGTGTGGGATTTGTTCTGAGAATGCGAATTGTGATAAGGTCAATGTTGGAGCAAGTAAGAACGGGTTCAGGTGCCACTGCCATGACGGTTTCAGAGGAGATGGCTTCAACAACGGTATCGGTTGCCAGAAAGTTTCTTATTGCAAGGGCTCAAGATTGAAGTTTGGAAGATGCGGGGAAGGAATCAAAATTGGTGTCCTTATTGGAGTTGGTGCCTTCCTGGTTGCAGCTGTGTCTCTGGTATGTTACTTCACCAGGCGCCGCGCCAATTGGCTGCGAAAACAAGTTCGAGCAAAGCATATATTACAAGAAGCTGCAGGCAACAACAGTGTCCCTTTCTACCCTTACAAGGAAATAGAAAGAGCCACAGATTTTTTCTCTGAGAAAAACAGGTTGGGAACTGGGGCTTTTGGTACAGTTTATGCTGGAAACCTTCACAATGATGAGTGGGTTGCTATAAAAAAGATCAAATACAGGGACACCAATAGTATTGACCAAGTAATGAATGAGATCAAGTTACTATCTTCGGTGAGTCATCCGAATTTAGTCCGCCTCCTCGGCTGCTGCGTAGAGGAAGGAGAACAGATACTTGTTTACGAGTTCATGCCGAATGGAACTCTATCACAACATTTGCAGAGGGAGAGAGGTGGAGTACTTTCTTGGACAGTAAGGCTCACAATTGCAACTGAAACCGCCAACGCCATTGCATATCTCCACTCTGCAATAGATCCTCCAATTTATCACAGAGACATAAAATCCAGTAACATACTCTTGGACTATAACTTCCAATCAAAAGTTGCAGACTTTGGCCTTTCCAGGATTGGCATGACAGAAACCTCTCATATCTCGACAGCGCCGCAGGGGACACCTGGCTATGTTGACCCTCAATACCATCAGAATTTCCATCTTTCTGATAAAAGCGATGTGTATAGCTTTGGAGTGGTTCTTGTTGAGATAATAACTGCCATGAAAGTGGTTGATTTCGCAAGGGCTCGTAGCGAGATTAATTTGGCTGCACTTGCTGTTGATAGGATTAGGCGTGGATTGGTAGATGAGATCATTGATCCCTACCTTGAACCACATAGAGATGCTTGGACTCTCTACTCTGTTCACAAGGTAGCCGAGCTTGCGTTTCGATGCCTGGCTTTTCATAGCGACATGAGGCCAACCATGATGGAAGTTGCCGAGGAGCTAGAACACATCAGACGAAGCGGTTGGACGACTATGGAAGAAACCATCTACATGGCTTCACCGGCCGTGTCCGCCTGTTCGTCGCCTCGAAACAGAAGCCAGAAGTCAATGAATAGTGTCCATTTTGAGAGAGCGGGACAAGAGAGTGAGGCATTTAGTGTTGTTCCATTGGAAGAGGTAAGGGAGAGTTCCCCAGTTTCTGTGCATGTTGCTTGGTTAAGTGGACCTAGCTCACCCTCAACTAATAGCTTGTTGGGAAATGTAGTTCAGTGA 2076 0.4547 MFHFHTNLSILLLLTTILVLFNTTRGKNHNNCNRSCGEYSLPYPFGFSDDCEIKLNCTTTNRNKRVQIGNLQVQNVTSESIFITLPAECNRGKDFIEPLFGENYGPTWNNSFLVQGCEHELGGCNIPIASFVGSQSEIKGCDRRSENISCFTKPPQQKERADVVSVTDWRGIGCRSLFSAFAFDKSKEVSLQFQVVELGWWLEGSCGICSENANCDKVNVGASKNGFRCHCHDGFRGDGFNNGIGCQKVSYCKGSRLKFGRCGEGIKIGVLIGVGAFLVAAVSLVCYFTRRRANWLRKQVRAKHILQEAAGNNSVPFYPYKEIERATDFFSEKNRLGTGAFGTVYAGNLHNDEWVAIKKIKYRDTNSIDQVMNEIKLLSSVSHPNLVRLLGCCVEEGEQILVYEFMPNGTLSQHLQRERGGVLSWTVRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFQSKVADFGLSRIGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARARSEINLAALAVDRIRRGLVDEIIDPYLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWTTMEETIYMASPAVSACSSPRNRSQKSMNSVHFERAGQESEAFSVVPLEEVRESSPVSVHVAWLSGPSSPSTNSLLGNVVQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00071 691 Pfam Protein kinase domain 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00071 691 Gene3D Transferase(Phosphotransferase) domain 1 406 621 - -
Arst1g00071 691 FunFam Wall-associated receptor kinase-like 14 297 405 - -
Arst1g00071 691 Gene3D Laminin 208 242 - -
Arst1g00071 691 ProSiteProfiles Protein kinase domain profile. 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00071 691 SMART serkin_6 330 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00071 691 SUPERFAMILY Protein kinase-like (PK-like) 312 603 IPR011009 -
Arst1g00071 691 FunFam Wall-associated receptor kinase-like 20 406 615 - -
Arst1g00071 691 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 674 IPR044652 GO:0004672
Arst1g00071 691 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Arst1g00071 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Arst1g00071 691 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00071 Arst-Chr1 767851 773604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00071 32 689 Receptor kinase-like Gene Family AT2G23450 56.101 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst1g00071 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00071 - - gmx:100810861 997.653