Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00029 ATGGGAGGAGCCACCGCGCAACAGCAGGAGTTAGAGAACATAATGGAAAAAGTCAAAGATGCCCAAAGATGCAAACAAACCAGGCGGATCCTAAAGTCAACCCTAAAGGGTTCAAAGTCTCTTGTGTACGAAATCAAGCAATATAACAACGACCTTGATCAACCAAGAGATGAAATTAAAGCTCTGATCAAAGAAAATGGTGCAGCTCAAGATTCAGAATCGCCATGCTGCAATTGCTTCTCGTCTTGTTCCCTTTGGTTTGGTAAGTGCTTCTTTCATATCCCTTTCTACAGGATAAGATCGGTGCGGAGCGAGAGGAACAGTTATTGTGATGCGAAGGAGATGCTTCTGAATGTTAGGGACGTTCTTGAACTTCTTAGTAGACAGAATATCGAGAAGAGGCTTAGCGGCGGTTCGATTAAGCGTCGTCCTTGTGGTTTTCCTGAGAAACCGGGTTTTACTGTTGGATTGGATGAGCCTTTGAGGAGGCTGAAGGTGGAGGTTCTGATGGAGGGCGTTTCGGTAATTGTATTGACTGGACTTGGTGGTTCTGGAAAGACTACTCTGGCTACAATGCTCTGTTTTGATGAACAAGTCAAAGGCATGTTTGCAGACAATATCTTCTTCCAGACAGTGTCGAAATCACCCAACTTGAAGAGCATTGTACAGACACTATTTGAACACTGTGGACACCGGGCACCAAAGTTTCAAACCGATGAAGAGGCAATTAACCGGTTGGGGAACTTGCTGAGGCATGTTGGGGATAAAGGTAGACCAATATTATTGGTCCTGGATGATGTATGGTCTGGCACAGATTCAATTGTTGAAAAGTTCAAATTCTCCACCATTCCAAATTACAAGATTGTAGTTACTTCAAGATTTGCATTTCGCAGATTCCATACTCAGTTCCACTTGAAACCACTTGGTGATGATGATGCCGTATCCCTCTTCCATCACTTTACACAAGCCAAAGACACTCACTCTTATAAGCCTGATGAAAATCTTGTCCATGAGATAGTGAGAGGTTGTAATGGTTCACCTCTGGCTCTAAAAGTTATTGGTGGATCCCTCTGTCATCATCCTTATGAGTTCTGGCAAACAATGAAGGAACGGCTTAAATCCAACAAAGACTTGGATTCTCACCTTCAGAATTGTCTAGACATAGTGGAAGATGACAAGGAGAAGGAGTGTTTCATGGACCTAGGTCTGTTCCCTGAAGATCAAAGGATCCGCGTTCCTTTGCTGAATGACATGTGGACAGAACTGCATGAACTTGATGAGGATGGAGTAAAAGCAATGAATATTATACATAGTTTAAACTCCAAGAATTTGGCTAATGTCATTGTTACAAGGAAAGTTGCAACGGACGTGGAAATGTACTACAATAACCACTTCCTTATGCAGCATGATCTCCTTAGAGAACTAGCAAACCATCAAAGCAACCAAGAATGGATCGAGCGAAGGAAAAGGCTGGCGATCGACTTGACTCGGAATGGGAAAAATTGTCCCAACTGGTTGGTAGGCCAGAATCAGCCGGGTATCGTTTCTCGCATGCTGTCATTCTTATCTGTAAGGGGGACACAACAACAACAGAAGCAGGAACAAGTCACTGCTCGCATAATGTTTGTTTCAACTGATGAAACATTCACTCCTGACTGGTACAACATGAACCCTGATGAAACTGAAGTTCTGATTTTAAATATCCATTCTAACAAGTATACATTTCCGGATTTCATTCAGAAAATGAGAAAACTCAAAGTTCTCATAGTCACAAATCAGGGTTTCCATCCTTGTGAATTGAACAACTTTGAGGTACTTGGTTCATTACCATGCTTGAAAAGGATTAGCCTGGAAAAGGTTTCGGTTCCTAGCCTCTGCAAATTGAGGAAGCTGCGAAATCTGTCGCTTTATATGTGTACTACAAAGCAGGCTTTTGGAAGTAGTGACATCAAAATTTCAGATGCACTGCCAAATTTAGTGGAGTTGAACATTGACTATTGCATGGATATGGTGGAATTGCCTTCTGATTTCTGTAACATTATGACCATGAAGAAGCTTAGTATCACTAACTGTCATAAGCTTTCTAAACTACCACCAGAAATCGTTATGCTGAAGAATCTGGAAGTTTTGAGACTTAGTTCCTGCTCTGATTTGAAAGAGATGCCAGAATCTGTTGGAAGGCTTCAACAGATTTGGTGTCTCGACATATCAGAGTGTATAAGCCTAACCCAGTTACCAGCAGACATCGGCGAGTTGCATAGTCTACGGAAGCTCTATATGTGGGGTTGCTCAGGATTGAACGAATTGCCGCACTCGGTCACATCCTTCGAAAATTTGAAGCATGTGATTCATGTGATCTGCGATGATGAGGTGGCTGCTTTATGGGAACATTTCAAAGAGTTCACCAGCCTTCCCAATCTGATGATAGTGAAGGTTAGAGCAGATATCAACCTGCGTTGGCTTCCTGGGTTTCATTGA 2478 0.4245 MGGATAQQQELENIMEKVKDAQRCKQTRRILKSTLKGSKSLVYEIKQYNNDLDQPRDEIKALIKENGAAQDSESPCCNCFSSCSLWFGKCFFHIPFYRIRSVRSERNSYCDAKEMLLNVRDVLELLSRQNIEKRLSGGSIKRRPCGFPEKPGFTVGLDEPLRRLKVEVLMEGVSVIVLTGLGGSGKTTLATMLCFDEQVKGMFADNIFFQTVSKSPNLKSIVQTLFEHCGHRAPKFQTDEEAINRLGNLLRHVGDKGRPILLVLDDVWSGTDSIVEKFKFSTIPNYKIVVTSRFAFRRFHTQFHLKPLGDDDAVSLFHHFTQAKDTHSYKPDENLVHEIVRGCNGSPLALKVIGGSLCHHPYEFWQTMKERLKSNKDLDSHLQNCLDIVEDDKEKECFMDLGLFPEDQRIRVPLLNDMWTELHELDEDGVKAMNIIHSLNSKNLANVIVTRKVATDVEMYYNNHFLMQHDLLRELANHQSNQEWIERRKRLAIDLTRNGKNCPNWLVGQNQPGIVSRMLSFLSVRGTQQQQKQEQVTARIMFVSTDETFTPDWYNMNPDETEVLILNIHSNKYTFPDFIQKMRKLKVLIVTNQGFHPCELNNFEVLGSLPCLKRISLEKVSVPSLCKLRKLRNLSLYMCTTKQAFGSSDIKISDALPNLVELNIDYCMDMVELPSDFCNIMTMKKLSITNCHKLSKLPPEIVMLKNLEVLRLSSCSDLKEMPESVGRLQQIWCLDISECISLTQLPADIGELHSLRKLYMWGCSGLNELPHSVTSFENLKHVIHVICDDEVAALWEHFKEFTSLPNLMIVKVRADINLRWLPGFH 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00029 825 Gene3D - 308 389 IPR042197 -
Arst1g00029 825 Gene3D - 141 302 IPR027417 -
Arst1g00029 825 PRINTS Disease resistance protein signature 254 268 - -
Arst1g00029 825 PRINTS Disease resistance protein signature 343 357 - -
Arst1g00029 825 PRINTS Disease resistance protein signature 702 718 - -
Arst1g00029 825 PRINTS Disease resistance protein signature 175 190 - -
Arst1g00029 825 Coils Coil 45 65 - -
Arst1g00029 825 Pfam NB-ARC domain 163 376 IPR002182 GO:0043531
Arst1g00029 825 Gene3D Ribonuclease Inhibitor 521 791 IPR032675 -
Arst1g00029 825 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 11 821 IPR039203 GO:0050832
Arst1g00029 825 Coils Coil 4 24 - -
Arst1g00029 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 390 IPR027417 -
Arst1g00029 825 SUPERFAMILY RNI-like 564 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00029 Arst-Chr1 408190 430127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00029 260 813 WRKY Transcription Factor Family AT4G12020 21.053 1.88e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00029 - - vvo:131652175 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00029 1 408190 430127 Arst1g00029 1 408190 430127 ECH