Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00024 ATGTCATCGACGAATTCGCCATGCGCGGCCTGCAAGTTCCTTCGTCGGAAGTGCACACAAGAGTGCATTTTCGCACCATACTTCCCACCGGACAACCCACAGCGCTTCGCATGCGTCCATCGCGTCTTCGGAGCCAGCAACATCGGCAAGATCCTCAACGATCTTAGCCCCTGCCAGCGGGAAGATGCGGTGACGTCCCTTGCGTTCGAGGCGGAGGCGCGCCTCGACAGCCCAGTGTACGGGTGCGTCAGACACATCGTCATCCTCCAACAGCGCCTGCACCAAATACAAATGGACCTCCTCCACGCCAAGAGCGAACTCAGCGCCTACATCAACCCACAAGGCATTCAGGGTCCGTTCTCCCCTCACGGAATTCGAGGGCTCCCACTTTACCCTCAAGGAAAGCCGCCGTCTTCGTCTGCGGCTCTTTTCGGCCCGCCTTACGGCCCAAATGTTATTCAGTCTTTGATGCCACCATCTTCTGTGCAGCATAATGGACCAATGAATGCTAATGCCGACCTGAATCCAGAGCAGCGCGAGTTGTTGGAACAGCAACATGACATGATGGTGAGAAACTATGAACAGCAGCAGCAGGAGTATCTAAGATACAACGCTGCTACTGGGATTGAACCTGTGGCAGCTGGAAGTCCGGTTTCAGTTGTCACAGCCGACGGTGATGGCCGTGGAAATGGAGTTTTTGCCCAGATGGCTGCACATTCAGGCGGTCAAGGAGGTGAGCTGACACCTTGTTTGGGTTTGGGGACATTTGACAGTGGTGGAACTTATCACCATCAGTTGCAACAAGAACCACCACAACATGGAGGAGTAGGGGAAAATTATGTTGGTCTTGCAAATCGTCATCACTATCCTGTTGAGGCGCAATTTCTGCTCCCATCACAACAACAACCGTCAGAGAGTGAGGACTGTAAGAGTGTCGGCCCTTCTTCATGA 951 0.5373 MSSTNSPCAACKFLRRKCTQECIFAPYFPPDNPQRFACVHRVFGASNIGKILNDLSPCQREDAVTSLAFEAEARLDSPVYGCVRHIVILQQRLHQIQMDLLHAKSELSAYINPQGIQGPFSPHGIRGLPLYPQGKPPSSSAALFGPPYGPNVIQSLMPPSSVQHNGPMNANADLNPEQRELLEQQHDMMVRNYEQQQQEYLRYNAATGIEPVAAGSPVSVVTADGDGRGNGVFAQMAAHSGGQGGELTPCLGLGTFDSGGTYHHQLQQEPPQHGGVGENYVGLANRHHYPVEAQFLLPSQQQPSESEDCKSVGPSS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00024 316 MobiDBLite consensus disorder prediction 297 316 - -
Arst1g00024 316 Coils Coil 179 199 - -
Arst1g00024 316 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Arst1g00024 316 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Arst1g00024 316 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 180 - -
Arst1g00024 316 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00024 Arst-Chr1 360876 361826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00024 1 225 AS2 family AT5G66870 47.257 2.04e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst1g00024 LOB 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00024 - - aip:110262357 607.831