Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00022 ATGTCATCGACGAATTCGCCATGCGCGGCCTGCAAGTTCCTTCGTCGGAAGTGCACACAAGAGTGCATTTTCGCACCATATTTCCCGCCGGACAACCCACAGCGCTTCGCAAGCGTCCATCGCGTCTTCGGCGCCAGCAACATCGGCAAGATCCTCAACGATCTTAGCCCCTGCCAGCGGGAAGATGCGGTGACGTCCCTTGCGTTCGAGGCGGAGGCGCGCCTCGACAGCCCAGTGTACGGGTGCGTCAGACACATCGTCATCCTCCAACAGCGCCTGCACCAAATACAAATGGACCTCCTCCACGCCAAGAGCGAACTCAGCGCCTACATCAACCCACAAGGCATTCAGGGTCCGTTCTCCCCTCATGGAATTCGAGGGCTACCACTTTACCCTCAAGGAAAGCCGCCGTCTTCGTCTGCGGCTCTTTTCGGCCCGCCTTACGGCCCAAATGTTATTCAGTCTTTGATGCCACCATCTTCTGTGCAGCATAATGGAACAATGAATGCTAATGCCGACCTGGATCCAGAGCAGCGCGAGTTGTTGGGGGCAGCACAGCAACATGACATGATGGTCAGAAACTATGAACAGCAGCAGCAGCAGCAGCAGCAGGAGTATCTAAGATACAATGCTGCTACTGGGGTTATTGAACCTGTGGCAGCTGCAAGTCCGGTTTCAGTTGTCACAGCCGACGGTGATGGCCGTGGAAATGGAGTTTTTGCCCAGATGGCTGCACATTCAGGCGGTCAAGGAGGTGAGCTGACACCTTGTTTGGGTTTGGGGACATTTGACAGTGGTGGAACTTATCACCATCAGTTGCAACAAGAACCACCACAACATGGAGGAGTAGGGGAAAATTATGTTGGTCTTGCAAATCGTCATCACTATCCTGTTGAGGCGCAATTCCTGCTCCCATCACAACAACAACAGTCAGAGAGTGAGGACTGTAAGAGTGTCGGCCCTTGTTGA 969 0.5397 MSSTNSPCAACKFLRRKCTQECIFAPYFPPDNPQRFASVHRVFGASNIGKILNDLSPCQREDAVTSLAFEAEARLDSPVYGCVRHIVILQQRLHQIQMDLLHAKSELSAYINPQGIQGPFSPHGIRGLPLYPQGKPPSSSAALFGPPYGPNVIQSLMPPSSVQHNGTMNANADLDPEQRELLGAAQQHDMMVRNYEQQQQQQQQEYLRYNAATGVIEPVAAASPVSVVTADGDGRGNGVFAQMAAHSGGQGGELTPCLGLGTFDSGGTYHHQLQQEPPQHGGVGENYVGLANRHHYPVEAQFLLPSQQQQSESEDCKSVGPC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00022 322 Coils Coil 185 212 - -
Arst1g00022 322 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Arst1g00022 322 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 199 - -
Arst1g00022 322 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00022 Arst-Chr1 351257 352225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00022 1 210 AS2 family AT5G66870 48.402 6.86e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst1g00022 LOB 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00022 - - aip:110262357 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00022 1 351257 352225 Arst1g00022 1 351257 352225 ECH
Arst5g00887 5 8322105 8324840 Arst1g00022 1 351257 352225 PCT