Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00020 ATGCGGTGGATACACCTTACGTTTACCAAAGACAAAGACAAAAACAACTATTACGCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCTCCCGTCGTTGAAAACCACAAGAAAACATGGCGGTTCCGCAGCGGGAACAAGAAGCGTCTCAACAACGATGGAAAGTCTGGTAACATTTACAAGAAGCATGTTGACGTGGAAGAGGAGGCTGCCTTGGCGATCACGACCACCTCTCCTTCCGGCATTCGCACCACATCCACCTCCTCCTCTGCGTCAGCGTCTTCCTCCGCCATGCCTCTCCCGTTGCCGTTGCCACAGCGTGATGCAGAATCTCGCCAACCGTCACCTGTGAGAACCTCCAGCGGCGCTAGCTCCAATGGCTATCGATCCGCGGAGGATCGGGATCAAACTGATGCTGCGGCAGCTGTCAACGGTTCATCCTTCACGGGCTTCAAGATGAGGAGTGTTTTTGCTAGCAACAGAGACACAAGGCGGAAGGCTGATCAGATAGAAAATCGCTTGTCACCGAGATCTCAAGAAAACTATTGCTTAAGCCACTCCGGCAGGAGTGGTTCGAGTAGTCCCTTTGCAAGTCCCAAGATCAGTCCATGTAGCACAGATGATTTCGTGCCATATCATTATGTGGCTCCAAAAGGAAACCAATTCTGGTCTGCACCTGAGATAACTAATTCAGAATCATCCATTCATCCAATCTTTGATTTATCGGCGTCTGGCACCGAAACCTCGCCAAAGGGAAGACCTCAGCTACTCCATGTTAAGAGCTCAAGTGGACCTCCATCACCCTTGCACGGCGGCATGATGAATGAGACTGCATCAGCGCGCCGGGCTGAAGGTAATTCTGTCAGTGTCCACCGTTTACCCCTGCCTCCCATGCCCAACTCACCTACCCTAACCGCTGCAACTACCTACTCCCACGCCGCGGGGAGATCAGAATCTTTGCCAATGAAAAGCCAATGGAAGAAAGGGAAACTTATTGGTCGTGGCACGTTTGGAAGTGTTTATGTTGGCACTAATAGAGAAACTGGAGCATTGTGTGCTGTGAAAGAAGTAGAATTATGTCACGAGGATCCAACTTCCATAGAGTCTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATTCAAATATTGTGCAGTACTATGGTAGTGAAGTAGTTGAAGACAAATTCAATATTTATCTGGAATATGTACATCCTGGTTCAATTAATAAATATGTCCGCGACCATTGTGGTGCCATAACAGAATCGGTCGTTAGGAATTTTACTCGCCATATTCTTTCAGGGTTGGCATACTTGCATAGCAAGAAAACAATTCATAGGGACATTAAAGGGGCTAATTTGCTTGTCGATTCGGCAGGAGTTGTCAAACTTGCTGATTTTGGAATGTCAAAGCATCTTAATGGATATGAAGGTAATCTCTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAGACTGTTGTTATGCATAAGGATAACAACTCGGATCTAGCTTATGCTACTGATATTTGGAGCCTCGGTTGTACAATCATTGAAATGTTCAATGGGAAGCCTCCATGGAGCGAGTTCGAAGGAGCTGCAGCAATGTTTAAGGTTATGAAAGATACCCCGCCTATACCGGAAACATTGTCAGCCGACGGCAAAGATTTCTTGAGGTGCTGCTTTAGAAGAAATCCGGCAGAGCGACCTACTGCTGCAATGTTACTCGAACATCGATTTTTGAAGAACTCTCAACCGATGGATGTTACACCTTCCACTCAATTGTACAATGGAACAACAATCATGGATAAAACTCTAGGCCCTCATAGTCCCACAGGGCATCTAGAAAATATACCTGATCAGATATCTATCTCGTGCGAGAAGATTGCGAAGTTGAAAGCTGCAGAGCGGCGAGGAATTCTTATTCCTAGCTTGGATATCTTGCCAGCATACCAAAGACAATAA 1986 0.4622 MRWIHLTFTKDKDKNNYYASSSSSSSSSSSPVVENHKKTWRFRSGNKKRLNNDGKSGNIYKKHVDVEEEAALAITTTSPSGIRTTSTSSSASASSSAMPLPLPLPQRDAESRQPSPVRTSSGASSNGYRSAEDRDQTDAAAAVNGSSFTGFKMRSVFASNRDTRRKADQIENRLSPRSQENYCLSHSGRSGSSSPFASPKISPCSTDDFVPYHYVAPKGNQFWSAPEITNSESSIHPIFDLSASGTETSPKGRPQLLHVKSSSGPPSPLHGGMMNETASARRAEGNSVSVHRLPLPPMPNSPTLTAATTYSHAAGRSESLPMKSQWKKGKLIGRGTFGSVYVGTNRETGALCAVKEVELCHEDPTSIESIKQLEQEIKVLSQLKHSNIVQYYGSEVVEDKFNIYLEYVHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMSKHLNGYEGNLSLKGSPYWMAPELMQTVVMHKDNNSDLAYATDIWSLGCTIIEMFNGKPPWSEFEGAAAMFKVMKDTPPIPETLSADGKDFLRCCFRRNPAERPTAAMLLEHRFLKNSQPMDVTPSTQLYNGTTIMDKTLGPHSPTGHLENIPDQISISCEKIAKLKAAERRGILIPSLDILPAYQRQ 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00020 661 Gene3D Transferase(Phosphotransferase) domain 1 322 612 - -
Arst1g00020 661 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 24 597 - -
Arst1g00020 661 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Arst1g00020 661 ProSiteProfiles Protein kinase domain profile. 326 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00020 661 FunFam Mitogen-activated protein kinase kinase kinase 5 323 621 - -
Arst1g00020 661 MobiDBLite consensus disorder prediction 112 130 - -
Arst1g00020 661 Pfam Protein kinase domain 327 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00020 661 MobiDBLite consensus disorder prediction 14 59 - -
Arst1g00020 661 MobiDBLite consensus disorder prediction 243 274 - -
Arst1g00020 661 MobiDBLite consensus disorder prediction 77 143 - -
Arst1g00020 661 MobiDBLite consensus disorder prediction 36 59 - -
Arst1g00020 661 SUPERFAMILY Protein kinase-like (PK-like) 320 610 IPR011009 -
Arst1g00020 661 SMART serkin_6 326 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00020 661 MobiDBLite consensus disorder prediction 14 35 - -
Arst1g00020 661 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00020 Arst-Chr1 324663 329767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00020 36 626 MAP Kinase Kinase Kinase AT5G66850 51.515 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst1g00020 Pkinase 3.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00020 - - gmx:100790701 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00885 5 8271477 8274724 Arst1g00020 1 324663 329767 PCT