Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst17566g00082 ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTCAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGCCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGCCGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATCTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACACCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATTAAAATGGGAAATGCCCTACCTTTGACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGGAATGTTGGGGTAAACCAGAAAACTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGATCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTACTAAATAG 825 0.44 MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKTLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRTK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst17566g00082 274 ProSitePatterns Ribosomal protein L2 signature. 216 227 IPR022671 GO:0003735|GO:0005840|GO:0006412
Arst17566g00082 274 MobiDBLite consensus disorder prediction 258 274 - -
Arst17566g00082 274 FunFam 50S ribosomal protein L2 194 274 - -
Arst17566g00082 274 FunFam 50S ribosomal protein L2, chloroplastic 1 112 - -
Arst17566g00082 274 NCBIfam 50S ribosomal protein L2 3 273 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Arst17566g00082 274 MobiDBLite consensus disorder prediction 224 274 - -
Arst17566g00082 274 Pfam Ribosomal Proteins L2, C-terminal domain 123 249 IPR022669 GO:0003735|GO:0005840|GO:0006412
Arst17566g00082 274 SMART Ribosomal_L2_2 40 116 IPR002171 GO:0003735|GO:0005840|GO:0006412
Arst17566g00082 274 SMART Ribosomal_L2_C_2 122 251 IPR022669 GO:0003735|GO:0005840|GO:0006412
Arst17566g00082 274 Gene3D - 1 112 IPR012340 -
Arst17566g00082 274 PANTHER RIBOSOMAL PROTEIN L2 36 272 IPR002171 GO:0003735|GO:0005840|GO:0006412
Arst17566g00082 274 SUPERFAMILY Translation proteins SH3-like domain 124 271 IPR008991 -
Arst17566g00082 274 Hamap 50S ribosomal protein L2 [rplB]. 1 273 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Arst17566g00082 274 Gene3D - 116 194 IPR014722 -
Arst17566g00082 274 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 13 274 IPR002171 GO:0003735|GO:0005840|GO:0006412
Arst17566g00082 274 Gene3D Ribosomal protein L2, domain 3 195 273 IPR014726 -
Arst17566g00082 274 FunFam 50S ribosomal protein L2, chloroplastic 116 194 - -
Arst17566g00082 274 SUPERFAMILY Nucleic acid-binding proteins 2 123 IPR012340 -
Arst17566g00082 274 MobiDBLite consensus disorder prediction 1 25 - -
Arst17566g00082 274 Pfam Ribosomal Proteins L2, RNA binding domain 40 116 IPR022666 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst17566g00082 51 233 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 35.678 6.83e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst17566g00082 K02886 - cit:4271224 550.436