LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst17566g00078	ATGTCACGGCGAGGTACTGTAGAAGAAAAAACCGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATTTATCGAGCTATGAAAAAGATTCAACAAAAGACAGAAATAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGTGTAGGCGGATCTACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCAAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA	468	0.3974	MSRRGTVEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTEINPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR	155

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst17566g00078	155	CDD	uS7_Chloroplast	10	154	-	-
	Arst17566g00078	155	Hamap	30S ribosomal protein S7 [rpsG].	1	155	IPR005717	GO:0003735\|GO:0006412\|GO:0015935
	Arst17566g00078	155	PIRSF	RPS7p_RPS7a_RPS5e_RPS7o	2	155	IPR000235	GO:0006412
	Arst17566g00078	155	PANTHER	RIBOSOMAL PROTEIN S7	6	149	IPR000235	GO:0006412
	Arst17566g00078	155	ProSitePatterns	Ribosomal protein S7 signature.	20	46	IPR020606	GO:0003723\|GO:0003735\|GO:0006412
	Arst17566g00078	155	NCBIfam	30S ribosomal protein S7	3	155	IPR005717	GO:0003735\|GO:0006412\|GO:0015935
	Arst17566g00078	155	FunFam	30S ribosomal protein S7	1	155	-	-
	Arst17566g00078	155	Pfam	Ribosomal protein S7p/S5e	1	149	IPR023798	-
	Arst17566g00078	155	SUPERFAMILY	Ribosomal protein S7	2	149	IPR036823	-
	Arst17566g00078	155	Gene3D	Ribosomal protein S7 domain	1	155	IPR036823	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst17566g00078	22	149	Cytoplasmic Ribosomal Protein Gene Family	AT2G37270	34.532	7.54e-12	58.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst17566g00078	K02992		-	qsa:O6P43_034774	299.286

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