Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst17566g00056 ATGGGTAAGGACACCATCGCCGACATAATAACCTCTATACGAAATGCTGACATGAATGGAAGAGGAACGGTTCTAATACCATCTACTAACATTACTGAAAACATTGCTAAAATGCTTTTACGAGAGGGTTTTATTGAAAACGTGAGAAAACATAGGGAAGGGGGAAATTTTTTTTTAGTTTTAACTCTACGATATAGAAGAAATAGAAAAGGATCATCTAAAACGCGTTTGAATTTAAAACGGATCAGTACTCCTGGTCTACGAATCTATTCTAATTATCAACAAATTCCGAGAATTTTAGGGGGGATGGGAATTGTCATTATTTCTACTTCGAGAGGTATAATGACAGATCGAGAGGCTCGATTAGAACGAATCGGCGGAGAAGTTTTATGTTATATATGGTAA 405 0.3605 MGKDTIADIITSIRNADMNGRGTVLIPSTNITENIAKMLLREGFIENVRKHREGGNFFLVLTLRYRRNRKGSSKTRLNLKRISTPGLRIYSNYQQIPRILGGMGIVIISTSRGIMTDREARLERIGGEVLCYIW 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst17566g00056 134 PANTHER 40S RIBOSOMAL PROTEIN S15A 4 132 IPR000630 GO:0003735|GO:0005840|GO:0006412
Arst17566g00056 134 FunFam 30S ribosomal protein S8 77 134 - -
Arst17566g00056 134 ProSitePatterns Ribosomal protein S8 signature. 104 121 IPR000630 GO:0003735|GO:0005840|GO:0006412
Arst17566g00056 134 Hamap 30S ribosomal protein S8 [rpsH]. 1 134 IPR000630 GO:0003735|GO:0005840|GO:0006412
Arst17566g00056 134 Gene3D - 1 75 - -
Arst17566g00056 134 SUPERFAMILY Ribosomal protein S8 1 134 IPR035987 GO:0003735|GO:0005840|GO:0006412
Arst17566g00056 134 Gene3D - 77 134 - -
Arst17566g00056 134 Pfam Ribosomal protein S8 4 134 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst17566g00056 8 134 Cytoplasmic Ribosomal Protein Gene Family AT2G39590 29.323 4.28e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst17566g00056 K02994 - gmx:3989332 231.876