Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03959 ATGACAAGGTTGGCATATCTGCATGAACCAGGGGTACTTCAGAATTTGCATGTTCGATATGAAGTAAATGAAATATATACTTACACAGGAAACATATTGATAGCTGTAAACCCTTTCCAAAGATTACCTCATTTATATTCGAGGGAAACAATGGAGAAGTATAAAGGCGCGGCTTTCGGTGAGAAGAGCCCAAACCCCTTTGCCATTGCTGATTCTGCATACAGGAAGATGATAAATGAAGAAACAAGCCAATCCATTTTAGTTAGTGGAGAAAGTGGAGCTGGTAAAACAGAAAGTACAAAAATGCTTATGTGTTATCTTGCTTATATGGGAGGCAGAGCAGCTAATGAAGGACGCTCAGTTGAGCAACAAGTCTTGGAGTCCAATCCTGTTTTAGAAGCATTTGGCAACGCCAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGGTCTCGTGTCTGTCAGGTTTCCGATCCTGAGAGAAACTATCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATGTTGAAAAGTACAAATTGGGAAACCCAAGAACTTTTCATTACCTAAATCAATCAAATTGCATTGAGTTGCAAGGGTTGGATGATTCTAAGGAATACCTTGCAACTAGAAGAGCTATGGATGTTGTTGGGATCAATGGTAATGAGCAGGATGCCATATTTCGAATAGTAGCTGCAGTGTTGCACTTGGGAAATATTGAATTTGTTAAGGGGGACGATGAAGAGACTGATTCCTCTCAACCTAAGGATGACAAATCTCGTTTCCACCTTAAAACTGCAGCTGAGCTTTTGATGTGCGACGAGAAATCCCTTGAGGATTCATTTTGCAAACGTGTTATGGTCACTCGCGGCGATAAAATAACAAAGTCACTTGATCCCGTTGCTGCAAGTCTCAGCAGAGATGCTTTGGCTAAAATTATTTATTCAAGGCTTTTTGACTGGATTGTGGACAAGATTAACAATTCTATTGGGCAAGATCCACATTCAAAGAACTTAATCGGAGTCTTAGATATATACGGATTTGAAAGTTTCAAGACGAACAGTTTTGAGCAATTCTGTATCAATTTGACTAACGAGAAATTGCAACAGCATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAAGAATATACAAAGGAAGAAATCAATTGGAGTTATATAGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAAAAGAAACCAGGTGGCATTATCGCTCTTCTAGATGAGGCATGCATGTTTCCAAGATCAACCCATGAAACATTTGCCGAAAAGCTGTATCAAACATTTAAAAAAAATAAACGGTTTACGGATTTCACAGTAAACCACTATGCTGGTGATGTGACTTATCAAACAGACCTTTTCCTTGATAAGAACAAAGACTATGTTGTTCCAGAGCATGCTGCCTTACTCAATGCTTCAAAGTGCAACTTCGTTTCAGGGTTGTTCCCTCCTTTGCCTGAGGAAACTTCCAAATCAACCAAGTTTGCTTCTGTTGCAACTCAGTTTAAGCAACAACTGCAGTCTCTGCTGGAAACACTAAACGCTACTGAGCCACACTACATTCGCTGTGTAAAGCCCAACAACCTTCTTAAGCCTGGAATATTTGAGAACAGTAATGTGTTGCAGCAGCTACGATGCGGGGGAGTAATGGAGGCAATAAGAATTAGTTGTGCCGGATATCCTACTAGGAAGAACTTTGACGAATTCATTCGACGATTTAGTATCCTAGAACCTAAGGTTCTTACATCATGCCCTGATGAAATGACCAGTTGCAAGATGCTTCTTGACAAAGTGAACCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTTTGAGAGTAGGACAAATGGCACAACTAGATGCCTGTAGAGCAGAAGTATTAGGAAGATCTGCAACCATTATTCAAAGAAAAGTTTGCACATATCTTTGCCAAAAACACTACAACACATTGCGAATGTCTGCAATACAACTACAAAGGGTAGTCAGAGGACAACTAGCACGCTTTCATTATGAAAAAATGAGGAGGGAAGATGCTTCTGTGAAAATTCAAAAGAATCTTCGCATGCATCTTTCCAAGACTGCTTACCAAGCCCTCAAGGCTTCAGCTGTATTTATTCAGACTGCTATGAGAGGCAAGACTGCTAGAAATCAACTCAGATATAGGAAGTTAACCAGAGCTGCTGTAATCATTGAGAGACACGGTAGAGGTTACATAGCTCGTTCTCATTACAAACGTTTAAAGAATGCCGCTATTTTTGCACAATGTTCATGGAGGAGAACCATGGCTCGTAGAGAACTTCGAAAGCTTAGAATGGCTGCTAAGGAAGCCAAGGCTCTTGAAGCTGCAAAAAAAGAACTTGAAAAGCAAGTGGAAGAATTGAGTTTGTCTCTAGAATCAGAGAGAAGAATGAGGGTTGATATTGAGGAAGCCAAGACACAGGAAAATGAAAAACTACAATCAGCTTTGCATGAGATGGAGCTTCAACTCAAAGAAACTCAAGCTTCCTTGCATGAGATGGAGTCATTGCTTCTTAAGGAACGTCAGGCCCCTAAAACTGCCGATACAACACCTATGCAAGTTATTCAATCTAACGGAGCTGATAATGATATTGAATTGATTAGCAAGCTTACAGCAGAAAATGAACAACTCAAGGATCAGGTTAGTTCACTTGAACAGAAAATTAATGAAACAGAAAGGAAATATGAAGAATGTAGCAAACTTAGTGAGGAACGCATGAATCAAATCATAGAGACCGAAAGCAAGATAATTGAGCTAAAGACATCAATGCAAAGGCTTGAAGAAAAAGTTTCTGATATGGAAACTGAGAATCAAGTTTTAAGGCAGAAAAGCCTTTCGAGTTCATCATCAAAGAAAATGTCAGAAAAGAATCCATCTCAGTCATCGGAAAATGGTAGTAATCAGGCATCAACATCAGCAAGTTCAGGCCAGACAAAGACATTTGGAACCGATGCCGATAGCAAAGAGAGCATCGAAACTCTTTTCAAGTGCATCCAAAAAGATCTTGGATTCTCGGAAGGAAAACCCGTGGCAGCATTCACCCTTTATAACTGTCTGCTACATTGGAAATGTTTTGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAGCTGATTGGATCTGCAATAGAGGATCAAGATAACAATGGTTGCATGGCTTATTGGTTGTCCAACACATCTGCTTTGTTGTTCCATCTCCAGCGAACTCTTCGAGTCCCTACAGCACGAAAGCCACCCACTCCAACATCTTTCTTTGGAAGAGTCACTCAAGGATTTCGGTCATCGAAAAGTCTTTCCAGTGGTTCATTTGATGTGGAGCATCAAGTTGATGCCAAGTACCCTGCTTTACTTTTCAAGCAGCAACTTGCAGCTTACGTTGAGAAGATTTATGGAATTCTTAGAGAAAATTTGAAGAAAGACATATCTCCTCTAATTTCTGCTTTCATTCAGGCGCATGGAAAGTCAGATGATAACAACCATCCAGCTGCTTCATGGACTGCCATTGTACAATGCATTAACAGATTTCTCAATATTTTCAAAGAAAACCATGTGCATCCAGTTCTCGTTCAGAAGATATTCAGCCAAGTTTTTCAACATATCAATGCGGAAATCTTTAATAGCCTTGTTTCACAAAGAGAATGTTGCACATTCAACAATGGACAACTTCTCAAATCTGGATTGGCTGAACTAGAACAGTGGTCTACTGAAGCAACAGAAGAGTATGCTGGCACAACTTTGGATGAACTCAAACATGTAACACAAGCCGTTAGATTCTTGGTTGTAGAGAAAAAGGATGAATTATCATATGATGGTCTTACAAATGAGCTATGCCCTGTTCTTAGTTCTCACCAGCTTTACAGAATATGTACACTTTACTGGGATGGAAATGAAAATGACAGTAGCCAAAGTGTATCATCTGAAGTCATCTCTAGTTTGAAGCTGCTAATGACAGATGGTGTAGAAGATGATAGTAAATCCTACATGTTAGAAGACAATTCAAGTATCCCTATTATTGTTGAGGAGATTTCTAGCTCCCTCAAAGATAAGACTACTTCAAAAGTAAAGCCTCCTGAAGAACTTCTTGAGAATGCAGGCTTCCAATTTTTACATTAA 4245 0.3934 MTRLAYLHEPGVLQNLHVRYEVNEIYTYTGNILIAVNPFQRLPHLYSRETMEKYKGAAFGEKSPNPFAIADSAYRKMINEETSQSILVSGESGAGKTESTKMLMCYLAYMGGRAANEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVEKYKLGNPRTFHYLNQSNCIELQGLDDSKEYLATRRAMDVVGINGNEQDAIFRIVAAVLHLGNIEFVKGDDEETDSSQPKDDKSRFHLKTAAELLMCDEKSLEDSFCKRVMVTRGDKITKSLDPVAASLSRDALAKIIYSRLFDWIVDKINNSIGQDPHSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKKNKRLXTDFTVNHYAGDVTYQTDLFLDKNKDYVVPEHAALLNASKCNFVSGLFPPLPEETSKSTKFASVATQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENSNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFIRRFSILEPKVLTSCPDEMTSCKMLLDKVNLKDYQIGKTKVFLRVGQMAQLDACRAEVLGRSATIIQRKVCTYLCQKHYNTLRMSAIQLQRVVRGQLARFHYEKMRREDASVKIQKNLRMHLSKTAYQALKASAVFIQTAMRGKTARNQLRYRKLTRAAVIIERHGRGYIARSHYKRLKNAAIFAQCSWRRTMARRELRKLRMAAKEAKALEAAKKELEKQVEELSLSLESERRMRVDIEEAKTQENEKLQSALHEMELQLKETQASLHEMESLLLKERQAPKTADTTPMQVIQSNGADNDIELISKLTAENEQLKDQVSSLEQKINETERKYEECSKLSEERMNQIIETESKIIELKTSMQRLEEKVSDMETENQVLRQKSLSSSSSKKMSEKNPSQSSENGSNQASTSASSGQTKTFGTDADSKESIETLFKCIQKDLGFSEGKPVAAFTLYNCLLHWKCFEAEKTSIFDRLIQLIGSAIEDQDNNGCMAYWLSNTSALLFHLQRTLRVPTARKPPTPTSFFGRVTQGFRSSKSLSSGSFDVEHQVDAKYPALLFKQQLAAYVEKIYGILRENLKKDISPLISAFIQAHGKSDDNNHPAASWTAIVQCINRFLNIFKENHVHPVLVQKIFSQVFQHINAEIFNSLVSQRECCTFNNGQLLKSGLAELEQWSTEATEEYAGTTLDELKHVTQAVRFLVVEKKDELSYDGLTNELCPVLSSHQLYRICTLYWDGNENDSSQSVSSEVISSLKLLMTDGVEDDSKSYMLEDNSSIPIIVEEISSSLKDKTTSKVKPPEELLENAGFQFLH 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03959 1415 ProSiteProfiles Dilute domain profile. 1078 1363 IPR002710 -
Arst10g03959 1415 FunFam Myosin heavy chain 186 241 - -
Arst10g03959 1415 Gene3D - 665 715 - -
Arst10g03959 1415 Gene3D - 761 813 - -
Arst10g03959 1415 Gene3D - 716 760 - -
Arst10g03959 1415 Coils Coil 953 987 - -
Arst10g03959 1415 ProSiteProfiles IQ motif profile. 713 739 IPR000048 GO:0005515
Arst10g03959 1415 ProSiteProfiles IQ motif profile. 736 765 IPR000048 GO:0005515
Arst10g03959 1415 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Arst10g03959 1415 MobiDBLite consensus disorder prediction 972 1027 - -
Arst10g03959 1415 Gene3D - 375 553 - -
Arst10g03959 1415 FunFam Myosin 2 246 365 - -
Arst10g03959 1415 ProSiteProfiles IQ motif profile. 761 787 IPR000048 GO:0005515
Arst10g03959 1415 Pfam DIL domain 1237 1339 IPR002710 -
Arst10g03959 1415 Coils Coil 846 880 - -
Arst10g03959 1415 Gene3D - 597 660 - -
Arst10g03959 1415 FunFam unconventional myosin-Va 763 811 - -
Arst10g03959 1415 PRINTS Myosin heavy chain signature 26 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 PRINTS Myosin heavy chain signature 365 393 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 PRINTS Myosin heavy chain signature 418 446 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 PRINTS Myosin heavy chain signature 83 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 PRINTS Myosin heavy chain signature 130 157 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 ProSiteProfiles Myosin motor domain profile. 1 662 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 PANTHER MYOSIN 1 763 - -
Arst10g03959 1415 PANTHER MYOSIN 1 763 - -
Arst10g03959 1415 CDD MYSc_Myo11 10 650 IPR036018 -
Arst10g03959 1415 SMART DIL_2 1236 1343 IPR002710 -
Arst10g03959 1415 Pfam IQ calmodulin-binding motif 689 705 IPR000048 GO:0005515
Arst10g03959 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 812 IPR027417 -
Arst10g03959 1415 Gene3D Myosin VI head, motor domain, U50 subdomain 245 531 - -
Arst10g03959 1415 ProSiteProfiles IQ motif profile. 688 717 IPR000048 GO:0005515
Arst10g03959 1415 SMART iq_5 664 686 IPR000048 GO:0005515
Arst10g03959 1415 SMART iq_5 712 734 IPR000048 GO:0005515
Arst10g03959 1415 SMART iq_5 735 757 IPR000048 GO:0005515
Arst10g03959 1415 SMART iq_5 687 709 IPR000048 GO:0005515
Arst10g03959 1415 SMART iq_5 760 782 IPR000048 GO:0005515
Arst10g03959 1415 SMART iq_5 783 805 IPR000048 GO:0005515
Arst10g03959 1415 MobiDBLite consensus disorder prediction 981 1027 - -
Arst10g03959 1415 Gene3D Kinesin motor domain 1 592 IPR036961 -
Arst10g03959 1415 Pfam Myosin head (motor domain) 1 650 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 713 IPR027417 -
Arst10g03959 1415 Gene3D - 186 244 - -
Arst10g03959 1415 Coils Coil 904 948 - -
Arst10g03959 1415 SMART MYSc_2a 1 663 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 SMART MYSc_2a 1 663 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst10g03959 1415 Coils Coil 797 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03959 Arst-Chr10 105950715 105958829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03959 1 1415 Myosins gene family AT5G43900 64.016 0.0 1875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03959 K10357 - zju:107422621 1880.53