Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03954 ATGATATTCAAAGATTGGCCTTTGGGATGGAGTAGTGCTCCCATTCTATCTAGACAATATGTTGCTCCTCCAGAATATTCTTGGGGATCACTCCATCTAAAGAGTCCTCCAGCTTTTTCTACAGTCCTAAAGCACTTGCAAGTAATCGGGGAAAATGGAGGTGAAGATACTCTTTCTCATTGGCCCATTGCTTCAGCAATGAACATTGAAGAATGTACCTGTGAAATTTTGAAATATTTGGACAAAATCTGGGGTTCCCTGTCTTCTTCAGATGTGGCAGAGCTACGGAAAGTGGCCTTTGTACCTGCTGCAAATGGAACACGCCTGGTGACTGCTGATGTTTTATTTGCTCGTTTAACTATTAATTTGTCTCCCTTTGCTTTTGAACTTCCTTCCGTATATCTCCCATTTGTGAAGATTCTTAAAGATTTGGGACTTCAGGAAATGCTAACACTTTCTGCTGCAAAAGATCTTCTCTTAAATCTTCAAAAAGCATGTGGATATCAGCATCTAAATCCAAATGAGCTCCGTGCTGTGATGGAAATTTTGAATTTTATTTGTGATCAGATTGTTGAGGGAAATTCATTTGATCGATCCAACTGGAAATCAGAAGCCATTGTACCTGATGATGGCTGTAGACTTGTTCATTCAGCTTCTTGTGTCTACGTTGATTCTTATGGTTCTCGATATGTCAAATGTATTGATACTTCCAGAATTAGATTTGTCCATGAGGATCTTCCCGAGAGAGTTTGTGTTGTTTTGGGAATCAAAAAATTGTCTGAAGTTGTCATAGAGCAACTAGATGAGAATCACAAGTTGGAATCTTTGGGATCAATTAGATCTGTTTCACTGGGAACTGTCAAGCAGAAGTTATTAAGCAGATTTCTTCAGAGTGCTGTATGGACTGTTGTTAATAGCATGGACAGTCACATTCCTGGATTCAAAAGCCCTTCATTGGATGCAATAGAATGTTTATTGAACTCTTGTGCAGAAAAGCTGCAATTTGTTAAGCATCTCAAAACAAGGTTTTTCCTCATGCCCAATTTGGTAGATGTCACACGTGCGGCCAAAGATTTCATTATCCCGGAGTGGGAGAATGATTCTGCACATCAAACTCTCTATTTTATGAATCAATCAAAATCCTGTATTATAGTTGCTGAACCACCAACTTATATTTCCATTTTTGATCTCATTGCTATTGTAGTAAGTCAGGTATTAGGGTCTCCTATTATATTGCCTATTGGATCCTTGTTTGTATGTCCTGAAGGATCTGAGATTTCAGTTGTTAATGTTTTAAACCTTTGCTCTGACAAGAAAGAAGTTGAACACATAAATGGAACCAATCATTTTGTCGGCAAAGAAATATTGCCACAAGATGCTCGTCTTGTTCAGCTGCATCCGTTGAGGCCTTTCTACTCTGGTGAAATAGTGGCTTGGCGCTCTCAACAGGGAGACAAACTGAAATATGGTAAGGTTCCTGAGGATGTAAGGCCATCAGCAGGTCAAGCTCTGTACAGATTTAAGATTGAAGTTGCACCAGGGGTTACACAACTTTTCCTTTCATCACAAGTATTTTCATTTAAAAGTGTATCAGCAAGCAGTACCCTGCAAGAAGCATTGGTGCATGAAAGCCCAGTAGTATTTGACAGTAACAGGCCTCAAGATGGACTCCCGGAGAGTTCATCAAGGAGAGAAATCTACTCTCAGCTATGTGAACAGGCACAACCTCAGAAAGAAAAATCTGGCAGAGTTTCAGCTGGAGAACTGGTGCAGGCTGTGAATGAAATACTCTCAGCTGCTGGGATCAGTATGGATGTGGAGAAGCAGGCCCTTCTTCAGAGAACAATAAATTTGCAAGAAAATCTTAGAGAATCTCAGGCAGCACTTCTGCTGGAGCAGGAAAAGGTTGAAAAAGCAACAAAAGAAGCTGATACAGCAAAAGCAGCATGGGTTTGTCGGGTTTGTCTGAGTAATGAGGTTGATATAACTATAGTTCCTTGTGGTCACGTATTGTGTAGAAGATGTTCATCAGCAGTATCGAAGTGTCCCTTTTGTCGGCTTCAGGTCACGAAGGCTATTAGAATTTTCCGTCCATGA 2097 0.4034 MIFKDWPLGWSSAPILSRQYVAPPEYSWGSLHLKSPPAFSTVLKHLQVIGENGGEDTLSHWPIASAMNIEECTCEILKYLDKIWGSLSSSDVAELRKVAFVPAANGTRLVTADVLFARLTINLSPFAFELPSVYLPFVKILKDLGLQEMLTLSAAKDLLLNLQKACGYQHLNPNELRAVMEILNFICDQIVEGNSFDRSNWKSEAIVPDDGCRLVHSASCVYVDSYGSRYVKCIDTSRIRFVHEDLPERVCVVLGIKKLSEVVIEQLDENHKLESLGSIRSVSLGTVKQKLLSRFLQSAVWTVVNSMDSHIPGFKSPSLDAIECLLNSCAEKLQFVKHLKTRFFLMPNLVDVTRAAKDFIIPEWENDSAHQTLYFMNQSKSCIIVAEPPTYISIFDLIAIVVSQVLGSPIILPIGSLFVCPEGSEISVVNVLNLCSDKKEVEHINGTNHFVGKEILPQDARLVQLHPLRPFYSGEIVAWRSQQGDKLKYGKVPEDVRPSAGQALYRFKIEVAPGVTQLFLSSQVFSFKSVSASSTLQEALVHESPVVFDSNRPQDGLPESSSRREIYSQLCEQAQPQKEKSGRVSAGELVQAVNEILSAAGISMDVEKQALLQRTINLQENLRESQAALLLEQEKVEKATKEADTAKAAWVCRVCLSNEVDITIVPCGHVLCRRCSSAVSKCPFCRLQVTKAIRIFRP 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03954 698 ProSiteProfiles Zinc finger RING-type profile. 652 686 IPR001841 -
Arst10g03954 698 SUPERFAMILY RING/U-box 651 692 - -
Arst10g03954 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 628 697 IPR013083 -
Arst10g03954 698 SMART ring_2 652 685 IPR001841 -
Arst10g03954 698 Pfam Zinc finger, C3HC4 type (RING finger) 652 691 - -
Arst10g03954 698 Coils Coil 622 649 - -
Arst10g03954 698 PANTHER SACSIN 2 685 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03954 608 696 C3H Transcription Factor Family AT1G73950 32.222 2.55e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03954 K17592 - adu:107471784 1375.53