Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03953 ATGAGTTCCACCACCAATAATAATAATAATAATTCCAAGGAGGAGTACGATGATGCTTTCACCAAAGCTGCTTCATTCGCATTTGCTCAAGTGTTTCCTGCAATCTTGAACGCTGCTATTGATATGAACTTGTTTGATATCATATCAAAGGCAGAGAGTTCGTTAGGCATGTCAGCTTCTGAGATTGCATCTAAGATTCCAAAGCAACACAGCGAAATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCGTTCTCTTCTGACTTGCTCCATTCGCACCATTAATGAAGACGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGAAAATACTATACTAGTACTCATCATGATGAACAAGGAGGCTCCTGGATTGTAATGTCAACTATAACCTACCAAGGTTGCCGTCATATTTGGAAAGATACAAAGGATGCAATATTGGATGCTAACAATCACAATCATTTCCAAAAAGTGTACGGAAAGATGGCGTTTGAATATATGGAGACAGACACAGAGTTAGGTAACCTTTTCGGACAAGCAATGTCACAAGCTGGCTCTTTAGGATTGAAACAAGTTCTTAATGCATATAAAGGCTTTGAGGGAGTATCAACGTTAGTTGATGTAGGAGGTGGATATGGACAAACCTTGAAACAGATTCTCTTTCAATATCCATCAATTAAAGCAATTAATTTTGATCTGCCTCATGTTGTTAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGAGGAGACATGTTTAAAACTGTTCCAAAAGCTGATGCCATTTTACTCAAGCATGTATGTCATAATTGGGGAGATGAAGAATGTGTCAAGTTTTTAAGAAATTGCTATGAAGCTTTGCCACCACATGGGAAGGTCATAGTTTTGGATGCTTTATTGCCAGAAATTCCGAAATCAACATCATTTAAGGATACTCAGGCTGTGGATCTCGATTTTCTTATGTTTCTAGTTAACGGTGGAAAGGAAAGAACTGAAAAACAATTTGAGAAACTATGCAAGACCTCAGGATTTTCCCGATTTCAGGTTGCTTGCAATGATTCCTCAAATGTCGTTGCAGTCATGGAGTTTTACAAATAA 1113 0.3917 MSSTTNNNNNNSKEEYDDAFTKAASFAFAQVFPAILNAAIDMNLFDIISKAESSLGMSASEIASKIPKQHSEMGSRLERMLPSLVARSLLTCSIRTINEDGDTERVYAVSPVGKYYTSTHHDEQGGSWIVMSTITYQGCRHIWKDTKDAILDANNHNHFQKVYGKMAFEYMETDTELGNLFGQAMSQAGSLGLKQVLNAYKGFEGVSTLVDVGGGYGQTLKQILFQYPSIKAINFDLPHVVKNAPPHPGIEHIGGDMFKTVPKADAILLKHVCHNWGDEECVKFLRNCYEALPPHGKVIVLDALLPEIPKSTSFKDTQAVDLDFLMFLVNGGKERTEKQFEKLCKTSGFSRFQVACNDSSNVVAVMEFYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03953 370 Gene3D - 1 116 IPR036388 -
Arst10g03953 370 FunFam Caffeic acid 3-O-methyltransferase 2 116 - -
Arst10g03953 370 Gene3D Vaccinia Virus protein VP39 124 370 IPR029063 -
Arst10g03953 370 PANTHER O-METHYLTRANSFERASE 28 358 IPR016461 GO:0008168
Arst10g03953 370 CDD AdoMet_MTases 208 300 - -
Arst10g03953 370 Pfam O-methyltransferase domain 143 350 IPR001077 GO:0008171
Arst10g03953 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 359 IPR029063 -
Arst10g03953 370 PIRSF O-mtase 1 370 IPR016461 GO:0008168
Arst10g03953 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 370 IPR016461 GO:0008168
Arst10g03953 370 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Arst10g03953 370 SUPERFAMILY "Winged helix" DNA-binding domain 14 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03953 Arst-Chr10 105882506 105884716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03953 1 357 Monolignol Biosynthesis Gene Families AT5G54160 46.518 9.75e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03953 - - adu:107471788 639.417