Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03952 ATGAATATGATGAGTTCAATAACCACCAAGGAGGAGTACGATGATGCTTTCACCAAAGCTGCTTCCTTCGCATTTGCTCAGGTGTTTCCTGCAATCTTGAACGCTGCTATTGATATGAACTTGTTTGATATCATATCAAAGGCAGAGAGTTCATTAGGCATGTCTGCTTCTGAGATTGCATCTAAGCTTCCAAAGCAACACAGTGAGATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCATTCTCTTCTGACTTGCTCCATTCGCACCATTAATGAAGACGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGACAATACTATACAAGTACTCAACATGATGATGAACAACGAGGCTCCTGGATTGCAATGTCAACTTTATTCTATCGAGGTTACCGTCATCTTTGGACAGATACAAAGGATGCAATATTGGATGCTAACAATCACAATCATTTCCAAAAAGTGTACGGAAAGATGGCATTTGAATATATGGAGACACACACAGAGTTAGGTAACCTTTTCGGGCAAGCAATGTCACAAGCTGGCTCTTTAGGAATGAAACAACTTCTTAATGCATATAAAGGAGGCTTTGATGGAATATCAACGTTAGTTGATGTAGGAGGTGGATATGGACAAGTCCTCAAACAAATTCTCTTCCAATATCCATCAATTAAAGCAATTAATTTTGATTTGCCTCATGTTGTTAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGAGGAGACATGTTTAAAACTGTTCCAAAAGGTGATGCCCTTTTACTCAAGCATGTATGTCATAGCTGGGAAGATGAAGAATGTGTCAAGGTTTTAAGAAACTGCTATGAAGCGTTGCCACCACATGGGAAGGTCATAGTTATGGATGCTTTAATGCCAGAAATTCCGAAATCAACATCGTTTAAGGATACTCAGGCTGTGGATCTCGATTTTCTTATGTTTCTAGTTTCCGGTGGAAAGGAAAGAGACGAAAAACAATTTGAGAAATTATGCAAGACCTCAGGATTTTCCCGATTTCAGGTATTTCCTGCAATCTTGAACGCTGCTATTGATATGAACTTGTTTGATATCATATCAAAGGCAGAGAGTTCATTAGGCATGTCTGCTTCTGAGATTGCATCTAAGCTTCCAAAGCAACACAGTGAGATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCATTCTCTTCTCTCTTGCTCTATTCGCACCATTAATGAAGACGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGACAATACTATACTACTCATGAACAACGAGGCTCCCTGTCTGCAATGTCAACTTTAGTCTATCGAGGATACCGTCATCTTTGGAAAGATACAAAAGATGCAATATTGGATGCTAACAATCACAACCATTTCCAAAGAATGTATGGAAAGATGGCATTTGAATATATGGAAACAGACAGAGAGTTAAGTAACCTTTTCGGAGAAGCAATGTCTCAAGCAGGGCCTTTAGGAGTGAAATCAATCCTTGATGCATATAAAGGAGGCTTTGATGGAATATCAACCTTAGTTGATGTAGGAGGTGGATATGGACAAGTCCTCAAACAAATTCTCTTCCAATATCCATCAATTAAAGGAATTAATTTTGATTTGCCTCATGTTGTGAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGGGGAGACATGTTTGAAAGTGTTCCAAAAGGAGACGCCATTTTGCTCAAGCATGTATGTCATGACTGGGGAGATGAAGAGTGTGTCAAGTTTTTGAGAAAGTGCTACGAAGCTTTGCCAGCAGATGGGAAGGTTATAGTTTTGGAAATTTTAGTGCCAGAAATTCCCAAGTCAACATCGAAGGATCTTTATGCTGTGGACATGGATTACGGTATGTTTCTAGTTCATGGTGGAAAGGAAAGAACCGAGAAACAATATGAGAAATTATGCAAGAGGTCGGGATTTTCCAGATTTAAGGTTGCTTGCAATGATTCAACTGCCATTAATGCAGTGATGGAGTTTTACAAATAA 2070 0.4029 MNMMSSITTKEEYDDAFTKAASFAFAQVFPAILNAAIDMNLFDIISKAESSLGMSASEIASKLPKQHSEMGSRLERMLPSLVAHSLLTCSIRTINEDGDTERVYAVSPVGQYYTSTQHDDEQRGSWIAMSTLFYRGYRHLWTDTKDAILDANNHNHFQKVYGKMAFEYMETHTELGNLFGQAMSQAGSLGMKQLLNAYKGGFDGISTLVDVGGGYGQVLKQILFQYPSIKAINFDLPHVVKNAPPHPGIEHIGGDMFKTVPKGDALLLKHVCHSWEDEECVKVLRNCYEALPPHGKVIVMDALMPEIPKSTSFKDTQAVDLDFLMFLVSGGKERDEKQFEKLCKTSGFSRFQVFPAILNAAIDMNLFDIISKAESSLGMSASEIASKLPKQHSEMGSRLERMLPSLVAHSLLSCSIRTINEDGDTERVYAVSPVGQYYTTHEQRGSLSAMSTLVYRGYRHLWKDTKDAILDANNHNHFQRMYGKMAFEYMETDRELSNLFGEAMSQAGPLGVKSILDAYKGGFDGISTLVDVGGGYGQVLKQILFQYPSIKGINFDLPHVVKNAPPHPGIEHIGGDMFESVPKGDAILLKHVCHDWGDEECVKFLRKCYEALPADGKVIVLEILVPEIPKSTSKDLYAVDMDYGMFLVHGGKERTEKQYEKLCKRSGFSRFKVACNDSTAINAVMEFYK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03952 689 FunFam Caffeic acid 3-O-methyltransferase 331 438 - -
Arst10g03952 689 Gene3D Vaccinia Virus protein VP39 176 353 IPR029063 -
Arst10g03952 689 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 346 689 IPR016461 GO:0008168
Arst10g03952 689 SUPERFAMILY "Winged helix" DNA-binding domain 351 440 IPR036390 -
Arst10g03952 689 SUPERFAMILY "Winged helix" DNA-binding domain 11 116 IPR036390 -
Arst10g03952 689 CDD AdoMet_MTases 528 620 - -
Arst10g03952 689 Gene3D Vaccinia Virus protein VP39 497 676 IPR029063 -
Arst10g03952 689 Gene3D - 354 515 IPR036388 -
Arst10g03952 689 PANTHER O-METHYLTRANSFERASE 353 676 IPR016461 GO:0008168
Arst10g03952 689 Gene3D - 28 194 IPR036388 -
Arst10g03952 689 FunFam Caffeic acid 3-O-methyltransferase 2 113 - -
Arst10g03952 689 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 349 IPR016461 GO:0008168
Arst10g03952 689 Pfam O-methyltransferase domain 141 349 IPR001077 GO:0008171
Arst10g03952 689 Pfam O-methyltransferase domain 462 669 IPR001077 GO:0008171
Arst10g03952 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 355 IPR029063 -
Arst10g03952 689 Pfam Dimerisation domain 357 406 IPR012967 GO:0046983
Arst10g03952 689 Pfam Dimerisation domain 32 81 IPR012967 GO:0046983
Arst10g03952 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 455 675 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03952 Arst-Chr10 105873576 105904160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03952 352 684 Monolignol Biosynthesis Gene Families AT5G54160 47.917 1.81e-98 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03952 - - adu:107471788 1396.33