Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03948 ATGGATCGACCTGGAGGTGGTGCAGTGAATGTTGGTGTTGGAATGGATATGGCGATCATGCACGAGAGTGAAAGGTATGAACTTGTTCGTGATATTGGCTCTGGCAATTTTGGGGTGGCAAGGCTTATGAGAGATAAGCACACTAATGAGCTTGTTGCTGTCAAATATATTGAGAGAGGTGATAAGATAGATGAAAATGTGAGAAGGGAGATTATAAATCACAGATCACTGAGGCATCCAAATATTGTTAGATTCAAAGAGGTCATATTAACCCCTACACATTTGGCTATTGTGATGGAATATGCTGCTGGTGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTTAATGAGGATGAGGCGCGCTTCTTCTTCCAACAACTTATCTCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGTCATCGTGACTTGAAGTTAGAGAACACATTACTAGATGGCAGTCCAGCTCCTCGATTAAAGATATGTGATTTTGGGTATTCTAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCGTACATCGCTCCGGAAGTTCTACTCAGGAAGGAATATGATGGCAAGATTGCGGATGTGTGGTCTTGTGGTGTGACCTTATATGTCATGTTGGTGGGCTCATACCCTTTTGAGGATCCAGACGAACCAAAAAATTTCCAGAAGACAATTCATAGAATTCTGAAAGTCCAGTACTCAATTCCTGACAGCATTAGCATATCACCTGAATGCCGTCATCTGATTTCAAGGATCTTTGTCGCCGACCCTGCACAGAGAATAAACATTCCTGAGATTAGAAACCATCTGTGGTTCTTGAAGAACCTCCCAGCTGATCTCATGGTTGACTATACAAACACCCAGTTTGAGGAGCCTGAGCAACCAATGCAGAGCATTGAAGAAATCATGCAGTTAATTGCCGAGGCTACAATTCCCGCAGCCGGAACTCAGTCTCTGAACCGTTATCTAAACGGCAGCTTGGATATTGACGACATGGACGAAGACTTAGAGCTCGATGATCCCGACCTTGATATCGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1098 0.4344 MDRPGGGAVNVGVGMDMAIMHESERYELVRDIGSGNFGVARLMRDKHTNELVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFNEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRKEYDGKIADVWSCGVTLYVMLVGSYPFEDPDEPKNFQKTIHRILKVQYSIPDSISISPECRHLISRIFVADPAQRINIPEIRNHLWFLKNLPADLMVDYTNTQFEEPEQPMQSIEEIMQLIAEATIPAAGTQSLNRYLNGSLDIDDMDEDLELDDPDLDIDSSGEIVYAM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03948 365 SMART serkin_6 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03948 365 Gene3D Transferase(Phosphotransferase) domain 1 102 290 - -
Arst10g03948 365 PANTHER SERINE/THREONINE KINASE 24 311 - -
Arst10g03948 365 ProSiteProfiles Protein kinase domain profile. 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03948 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Arst10g03948 365 FunFam Serine/threonine-protein kinase SRK2E 17 101 - -
Arst10g03948 365 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Arst10g03948 365 Pfam Protein kinase domain 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03948 365 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Arst10g03948 365 SUPERFAMILY Protein kinase-like (PK-like) 24 315 IPR011009 -
Arst10g03948 365 FunFam Serine/threonine-protein kinase SRK2E 102 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03948 Arst-Chr10 105854939 105858030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03948 19 332 CBL-interacting serine-threonine protein kinases AT4G24400 39.752 1.25e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Arst10g03948 Pkinase 1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03948 K14498 - gmx:100804702 639.802