Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03920 ATGGCTCATCATCATCACCCTAAATTATTAGCTTCTTCTTTTCTCATCCTCTTTACTTTCTCTTCTCTTTCAACATTTTCACATGCACACTTTCTTCTAGAAGAACTCCATTTCCCCAATGACAGGCTTAAGAATGCCTATGTTGCTCTCCAAGCATGGAAACAAGCTATCTACTCTGACCCTTACAACACAACCGCTAATTGGGTTGGCAGCGATGTTTGCTCCTACAATGGCGTCTTCTGCGCTCCCGCTCTCGACGATCCCTCCCTCGACGTCGTCGCCGGCATCGACCTTAATCATGCTGACATTGCCGGACACCTTCCCGGCGAGTTAGGCCTCTTGACCGACTTGGCGCTTTTCCACATCAATTCCAACAGGTTCTGCGGAATCGTACCTCCATGCATGGAGAATCTAACTCTCATGCACGAGTTTGACATAAGTAACAATCGATTCGTTGGTGGCTTTCCCAACGTGGTTCTCAAATGGTCAGACATGAAGTATTTGGATCTTAGATACAACGATTTCGAAGGGTCTTTGCCGCCTCAACTGTTCGAGATGGATCTGGATGCAATCTTCTTGAACAATAACCGTTTCACCTCTGTTCTCCCTGCCACCCTCGGCAAATCCAAGGCTTCGGTTATTACTTTCGCTAACAATAAGTTCACAGGCTGCATTCCGAAATCGATTGGAAAGTTGAACAAGTTGAATGAGATTCTCTTCATGGGCAACAAACTGGGTGGTTGCTTCCCTCAAGAGATTGGAATGATGGAGGATTTGAATGTTTTGGATCTTAGCGACAACAATTTTGTAGGTACTCTGCCTAACATGACGGGTTTGCAGAACGTGGAGGTTATAGACATTGCAAGGAATGAGCTTAGCGGTTATGTGTCTGATTCTGTTTGTCAATTACCTTCTCTAAAGAACTTCACTTACTCTGATAATTACTTCAACGGGGAAGCTCCAGCTTGTGTTGCTGCTGTTGCTGCTTATAAGGGTTCAATTAGTACAACTGTTTTTGATGACTCAGGAAATTGTTTGACTGGAAGGAAGAATCAAAAGAAATCTAGGGTATGTTTGCCAGTACTAACACGGCCTGTAGATTGTAGTAAGACTTGTGGTGACGGAGAAGGAGGTGGTAATAATAATAAGGCCCCCTCGTTAACATCCAAAAAGTCACCTCCAAAGCCAAAGGTTAGTAAACCACATTCACCACCACCACCAGTTAGTTCTCCTCCTCCTCCTCCATCCCCTGTTTACTCACCACCACCACCACCACCTACATACTCTCCTCCTCCTCCTCCTCCACCAGTGCACTCTCCACCGCCACCAACTCAATCACCTCCCCCACCACCACCAGTTTACTCTCCCCCACCTCCAACTATGTCACCTCCTCCTCCTCCACCAGTTTTCTCTCCACCACCACCAACTCAGTCCCCTCCTCCACCCCCTGTTTACTCTCCACCACCACCAACTCAGTCCCCTCCTCCTCCTCCACCAGTTTACTCTCCACCACCACCAACTCAGTCACCACCACCTCCACCCCCGGTTTACTCACCGCCGCCACCAACTCAGTCACCTCCTCCTCCACCCCCAGTGTACTCTCCACCACCACCAACTCGGTCACCACCACCTCCCCCAGTTTACTCGCCACCACCACCAACTTACTCACCTCCTCCTCCAACCCCAGTATACTCACCACCGCCACCAACTAAGTCACCTCCTCCACCCCCAGTTTACTCGCCACCACCACCAGCATGGGATGATGATGTCGTCCTCCCACAACACTTTGGATCTGCATACAGATCACCTCCTCCACCGGCTATTATTGGATACTAA 1836 0.488 MAHHHHPKLLASSFLILFTFSSLSTFSHAHFLLEELHFPNDRLKNAYVALQAWKQAIYSDPYNTTANWVGSDVCSYNGVFCAPALDDPSLDVVAGIDLNHADIAGHLPGELGLLTDLALFHINSNRFCGIVPPCMENLTLMHEFDISNNRFVGGFPNVVLKWSDMKYLDLRYNDFEGSLPPQLFEMDLDAIFLNNNRFTSVLPATLGKSKASVITFANNKFTGCIPKSIGKLNKLNEILFMGNKLGGCFPQEIGMMEDLNVLDLSDNNFVGTLPNMTGLQNVEVIDIARNELSGYVSDSVCQLPSLKNFTYSDNYFNGEAPACVAAVAAYKGSISTTVFDDSGNCLTGRKNQKKSRVCLPVLTRPVDCSKTCGDGEGGGNNNKAPSLTSKKSPPKPKVSKPHSPPPPVSSPPPPPSPVYSPPPPPPTYSPPPPPPPVHSPPPPTQSPPPPPPVYSPPPPTMSPPPPPPVFSPPPPTQSPPPPPVYSPPPPTQSPPPPPPVYSPPPPTQSPPPPPPVYSPPPPTQSPPPPPPVYSPPPPTRSPPPPPVYSPPPPTYSPPPPTPVYSPPPPTKSPPPPPVYSPPPPAWDDDVVLPQHFGSAYRSPPPPAIIGY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03920 611 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 494 - -
Arst10g03920 611 MobiDBLite consensus disorder prediction 370 611 - -
Arst10g03920 611 Pfam Leucine rich repeat N-terminal domain 47 81 IPR013210 -
Arst10g03920 611 PRINTS Proline rich extensin signature 382 394 - -
Arst10g03920 611 PRINTS Proline rich extensin signature 419 435 - -
Arst10g03920 611 PRINTS Proline rich extensin signature 394 415 - -
Arst10g03920 611 PRINTS Proline rich extensin signature 439 456 - -
Arst10g03920 611 Gene3D Ribonuclease Inhibitor 45 342 IPR032675 -
Arst10g03920 611 SUPERFAMILY L domain-like 47 322 - -
Arst10g03920 611 FunFam Leucine-rich repeat receptor protein kinase EMS1 206 297 - -
Arst10g03920 611 MobiDBLite consensus disorder prediction 398 588 - -
Arst10g03920 611 FunFam Leucine-rich repeat extensin-like protein 1 47 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03920 Arst-Chr10 105777481 105779321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03920 35 579 Trihelix Transcription Factor Family AT3G19020 50.970 3.40e-164 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03920 - - aip:107621173 745.732