Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03900 ATGGGAACAGAAGAATCTGATAAACTTGGTGCATCTTTCAAATTTATGGAGCCTAAAGATGAAACTGTAAACAGGTCTTTGCAGCCACATTGGACTAGTTCTATGCAGTCAACCATCACTCAATATAATTTTTTGCATGAGTCCATGAGGATTTCTAATAATTCTGCTATAGCTGGAGTGATTCCAAATCAGCAGCAACAACCAAGTGCTGTCCCAGTAGTTGGGCCTGCTGGGGATGCTGCATCAGTTTTTTCTGAAAAAATACAAAGGATGTTTGGTGCAAATAACGAGGATTCAATTAAAAAATGTAATGGAAGCTTACAATCTAAAAGCTCAATCACTAAGGAAGCAAAAGAAATTAAGATCATCTGCTCAACTCCAAACCATGACATGAGTGGAGCAAGTGGAGGCAAAGAACCTTCAGATGAAGGCCATGACAGTAAACATGATTTCCCTTCACCAAAGCAGAAATGCAATGTGGTGTCTGAAAATGTAAATTCAAGAAAACAACACAAGGATACAATGGCTGGTCTGAATGCTTCTGCCAGTGTTGCTAAACTTGCAAAACTGGAAAATGATGAAATAAGGAAAGAAAGAAAAAGATTATCTAATCGCGAATCAGCCAAGAGATCAAGGTTAAGAAAACAGAAAGAATGCGAAGAGCTACGTGGAAACATGGACAATTTAAAGGATGAAAATTCCTCACTCACACACATGCTTATAAGGCTTTCAGAGGAATGTATGGATCTCAGCAATGAAAACGATTCTATCCAGGCAAAGAGCTTTTTATATCGAGGAAACAATACTAACAGAAAGTGTGTGATTTGGTTGAGGAACAGGCTGAACTGGTTAAGATGTATGGAGCAGAATCAATAG 876 0.3836 MGTEESDKLGASFKFMEPKDETVNRSLQPHWTSSMQSTITQYNFLHESMRISNNSAIAGVIPNQQQQPSAVPVVGPAGDAASVFSEKIQRMFGANNEDSIKKCNGSLQSKSSITKEAKEIKIICSTPNHDMSGASGGKEPSDEGHDSKHDFPSPKQKCNVVSENVNSRKQHKDTMAGLNASASVAKLAKLENDEIRKERKRLSNRESAKRSRLRKQKECEELRGNMDNLKDENSSLTHMLIRLSEECMDLSNENDSIQAKSFLYRGNNTNRKCVIWLRNRLNWLRCMEQNQ 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03900 291 Coils Coil 185 260 - -
Arst10g03900 291 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 257 IPR004827 GO:0003700|GO:0006355
Arst10g03900 291 SUPERFAMILY Leucine zipper domain 195 250 IPR046347 GO:0003700|GO:0006355
Arst10g03900 291 MobiDBLite consensus disorder prediction 125 158 - -
Arst10g03900 291 PANTHER G-BOX-BINDING FACTOR 3-RELATED 44 260 IPR044827 GO:0003700|GO:0006355|GO:0043565
Arst10g03900 291 CDD bZIP_plant_GBF1 197 248 IPR045314 GO:0003700|GO:0006355
Arst10g03900 291 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Arst10g03900 291 MobiDBLite consensus disorder prediction 139 153 - -
Arst10g03900 291 Pfam bZIP transcription factor 194 254 IPR004827 GO:0003700|GO:0006355
Arst10g03900 291 Gene3D - 194 252 - -
Arst10g03900 291 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03900 Arst-Chr10 105629810 105634837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03900 177 258 bZIP Transcription Factor Family AT4G36730 46.341 8.62e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst10g03900 bZIP_1 2.8e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03900 K09060 - gmx:102665715 193.356