Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03896 ATGCGCCATCGCAACGTTCCCCAATCCATGGACCTCGAGATGGAAGCCACAGGATTCGAATCCGAAGAAGAAGAAGAGGAAGAAGACGATGAAGACGACGAAGAAGAACAACATCCTCAAACCAATAACAACTACAACAACCCTTCTTCCTCCAACTCAAACCCTAACAGCACCACTGAGCCCTACATCGGCATGGAGTTCGACTCCGAGCTATCCGCACGCGCCTTCTACAACGCCTACGCGCGTCGCATCGGCTTCAGCACGCGCGTCAGCGTTTGTCTCCGCTCCCGAAAGGACTCCTCCGTTATCCGCCGCCGTGTTGTATGCTCCCGAGAGGGCTTCCGCCGCAACCCTGAGAACCACGACCCTAAGCGCCACCGCTCCGTGACACGTGTCGGCTGCAAAGCTCAGATCACCGTCAAGAAGAAGGGCCCACTCGGCAAGTGGTACATCTCCAAGTTCATCAAAGACCACAACCACGACCTCGTCCCTCCCGATAGGGTCCACTGCCTCCGCTCCCACCGCCGCGTCAACGGTGCCGCCCGCAGCCTCATCGATACTCTTCACGCAGCTGGCATGGGCGCTGCCGAGGTCATGACGGTACTCATCAAGGAGTCTGGCGGCATCGACAACGTCGGCTTCACAAAAGTTGACTGCCAGAACTACATGACGTCATCTTCTAAGAGGAGCCTCGGGAGTGGGAACCAGCTTGTCTTCGATTTCTTGAAAAAGATGAGTGAGGAGGATCCTTCTGGATTCTTCTACTCCTTCCAGGGCGATTCGGAGAGTTCCTCAGGTAACATCTTTTGGGCTGATGGCAATGCCAGGAGGAATTATGAATATTTTGGAGATGCTGTTGTTTTCGATATGGCGTATCGGAGGGGACGCTATAAAGTACCCTTTGCGCCTTTTACTGGATGGAACCATCACGGGCAGCCGGTGCTCTTCGGCTGCGCCCTGATGCTCAACGAATCCGAGGCGTCCTTCGTGTGGCTTTTTACCACATGGCTTCAAGCAATGTACGGCCGGCATCCTGTGTCCATTACTACTGATCAGGACAGGATAATTCACTCTGCTGTCTTGCAGGTTTTCCCAGATACTCGTCACCGGTTCTCCAAGTGGGACGTGTTCGGTGAGGTTCAGGAGAGGCTGATTGATGTGTGTGGAGTGCATCCTGAGTTTGAGTCTGAGTTTCGACGGTGCGTGAACTCGGCGGAGACAGTTGATGAGTTTGAGTCTAGCTGGAAGTTCCTTGTTGGGAGGTATGAGCTTCTGGATAATGAATGGCTTCAGTTGATGTACAGGAATCGCCATCAATGGGTGCCTGTTTATCTCCGCGACACCTTTTTTGGCGATTTGTCTGCCATCCATGGGAGTGATACTAGCAGCTCGTACTTTGATGGGTTTATTAATGCCACGACTACCGTCCAGACGCTGATTAAGCAGTATGAGAAAGGAGTCGCGGATCGATATGAGAAGGAAGTGAAGGAGGATTATGATACGCTGAACACCGCACCGGTTTTGAGAACTCCTTCTCCAATGGAAAAACAAGCGGCTGGTCTCTACACGAGGAAAATATTTGCAAGGTTCCAAGAGGAATTGGTTGAGACCCTTGCATATGCTGCTACGTTGATGGATGATGCAAGATCACAAGCTACTTATCGGGTGGCGAAGTACGGGGAGGAGAATAGAGCGCATTTTGTTAGGTTCAATGTCTTCAGGAAGAAAGCTAGCTGCAGCTGCCAAATGTTTGAGTTTGCGGGTCTTGTCTGTAGGCACATATTAGCAGTTTTTAGGGTCATCAATATTCTTACGCTTCCGTCCCATTACATCTTGAAAAGGTGGACGAGAAACGCAAAGAGTATCTTGTTGGATAAAGGAGCTCGAGAATTGCAAAATAGTCTGGAAGAGTGTTACTCCTCTCGCTACGATAGTTTGAGCCGGGAAATTATGAGTTATGTAGAAATGGGGGCAGAATCATCGGATACTTATAGCGTTGCGCTGAATGGTCTACGTGAGGCTGCGAAAAAGGTTGCGGATGCAAAGAAACCTCGTCCAGCTCCCGTGCAAAGTACTTCAGATAATAATGAAAACCATGAGAGTAGTCAATCTAGTGATACAACTGGCCTTTCTAAGGAATAA 2142 0.5047 MRHRNVPQSMDLEMEATGFESEEEEEEEDDEDDEEEQHPQTNNNYNNPSSSNSNPNSTTEPYIGMEFDSELSARAFYNAYARRIGFSTRVSVCLRSRKDSSVIRRRVVCSREGFRRNPENHDPKRHRSVTRVGCKAQITVKKKGPLGKWYISKFIKDHNHDLVPPDRVHCLRSHRRVNGAARSLIDTLHAAGMGAAEVMTVLIKESGGIDNVGFTKVDCQNYMTSSSKRSLGSGNQLVFDFLKKMSEEDPSGFFYSFQGDSESSSGNIFWADGNARRNYEYFGDAVVFDMAYRRGRYKVPFAPFTGWNHHGQPVLFGCALMLNESEASFVWLFTTWLQAMYGRHPVSITTDQDRIIHSAVLQVFPDTRHRFSKWDVFGEVQERLIDVCGVHPEFESEFRRCVNSAETVDEFESSWKFLVGRYELLDNEWLQLMYRNRHQWVPVYLRDTFFGDLSAIHGSDTSSSYFDGFINATTTVQTLIKQYEKGVADRYEKEVKEDYDTLNTAPVLRTPSPMEKQAAGLYTRKIFARFQEELVETLAYAATLMDDARSQATYRVAKYGEENRAHFVRFNVFRKKASCSCQMFEFAGLVCRHILAVFRVINILTLPSHYILKRWTRNAKSILLDKGARELQNSLEECYSSRYDSLSREIMSYVEMGAESSDTYSVALNGLREAAKKVADAKKPRPAPVQSTSDNNENHESSQSSDTTGLSKE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03896 713 Pfam MULE transposase domain 286 375 IPR018289 -
Arst10g03896 713 SMART 26again6 577 604 IPR006564 GO:0008270
Arst10g03896 713 Pfam SWIM zinc finger 576 601 IPR007527 GO:0008270
Arst10g03896 713 MobiDBLite consensus disorder prediction 677 713 - -
Arst10g03896 713 MobiDBLite consensus disorder prediction 40 62 - -
Arst10g03896 713 Pfam FAR1 DNA-binding domain 76 164 IPR004330 -
Arst10g03896 713 MobiDBLite consensus disorder prediction 688 713 - -
Arst10g03896 713 ProSiteProfiles Zinc finger SWIM-type profile. 570 602 IPR007527 GO:0008270
Arst10g03896 713 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 680 IPR031052 GO:0006355
Arst10g03896 713 MobiDBLite consensus disorder prediction 16 37 - -
Arst10g03896 713 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03896 Arst-Chr10 105620891 105626469 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst10g03896 MULE 2.6e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03896 - - cave:132190504 913.294