Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03890 ATGGATTCTCAAATCTTTAACTTCCTTGCTTTCATCTTCTTTCTCTTCTTCATCATTGCTGCTCTGAGAATAAGAAAGAAAAGTGATGTAATTCCAAATATACCCCCAGGACCATGGAAGCTACCTATCATAGGAAACATACCAAATCTTGTTACATCAACTCCACATAGAAAGCTAAGAGATTTGGCCAACAAATATGGACCATTGATGCACCTTCAACTTGGACAAGTCTCTACCATTGTTGTTTCCTCAGCAGAGTATGCTAAAGAGGTTATGAAGACACATGACATCATCTTTGCTTCAAGGCCTGCAGTTCTAGCAGCAAAGATAATTTCTTATGATTGCACAAACATTGGTTTTGCACCCTATGGAAATTACTGGAGGCAGTTAAGGAAGATTTGCACCTTGGAGCTCTTGAGCACGAAACGAGTCAATTCGTTCCGGCCAATAAGAGAAGAGGAGTTCACCAATCTTGTTAAGAGGATTATGTCCTCAAAGGAAGGATCAGTTAATCTCACTGAAGAAGTGCTTTCATCCATATATGGAATCGTTTCGCAGTCTGCGTTTGGAGGCACAAAACGTGGGGATCAAGAGAAGTTCATATGCCTTGTGCAACAAGCAACAGCAGTTGCAGGTGGTTTTGATGTAGGAGATCTGTTTCCTTCTTGGGAATGGCTTCAACTTGTGAGTGGATTGAGGCCTAAGCTTGAGAGTTTCCAAAGACAAATTGATGAGATATTGGAAAACATTGTTAGTGATCACAAAGAGGCAAAGTTGGAAGGTAAAGGCAAAAATGATGAAGATCTTGTGGATGTTCTCCTTCAATTTGAAGATGGTACCAATCAAGATATTTGCTTAAGTAGAAATAATATCAAGGCTATACTCCTGGATATGTTTGGTGGAGGAAGCGAGACATCGGCGCATACTATAGATTGGGCAATGTCAGAGATGATAAGGGATCCAAGAGTAATGCAGAAAGCACAAGCTGAGATCAGAGAGTTATTCAACAGAATAGGAAAGGTTGATGAGACTCTCATCAATGAACTCAAGTATTTGAAATCAGTTGTGAAAGAGACACTAAGGTTACACCCTCCAGCTCCTCTTTTACTTCCAAGAGAATGTGGAGAAGCTTGTGAGATCAATGGATATTACATTCCCTACAAAAGTAAGGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAAGAATTGGAGTGAACCAGAGAAGTTTTATCCAGAGAGGTTCATTGATAGTGACATAGATTACAAAGGTAATAACTTCGAGTTTGTACCGTTTGGTGCCGGAAGAAGAACATGCCCTGGCAGCACATTAGGCTTGCTAAATGTTGAGCTGGCGCTCGCATATTTGTTGTATCACTTTGATTGGAAGCTTCCAAGTGGAATGAAACATGAGGAATTGGACATGTCTGAGGCTTTTGGAGTTGCTGTTAGAAGAAAAAAAGACCTGCAATTGGTTCCCATTGTTTTTAGTCCTTTGCTTGAAACATAA 1512 0.4028 MDSQIFNFLAFIFFLFFIIAALRIRKKSDVIPNIPPGPWKLPIIGNIPNLVTSTPHRKLRDLANKYGPLMHLQLGQVSTIVVSSAEYAKEVMKTHDIIFASRPAVLAAKIISYDCTNIGFAPYGNYWRQLRKICTLELLSTKRVNSFRPIREEEFTNLVKRIMSSKEGSVNLTEEVLSSIYGIVSQSAFGGTKRGDQEKFICLVQQATAVAGGFDVGDLFPSWEWLQLVSGLRPKLESFQRQIDEILENIVSDHKEAKLEGKGKNDEDLVDVLLQFEDGTNQDICLSRNNIKAILLDMFGGGSETSAHTIDWAMSEMIRDPRVMQKAQAEIRELFNRIGKVDETLINELKYLKSVVKETLRLHPPAPLLLPRECGEACEINGYYIPYKSKVIVNAWAIGRDPKNWSEPEKFYPERFIDSDIDYKGNNFEFVPFGAGRRTCPGSTLGLLNVELALAYLLYHFDWKLPSGMKHEELDMSEAFGVAVRRKKDLQLVPIVFSPLLET 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03890 503 Pfam Cytochrome P450 35 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Arst10g03890 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 SUPERFAMILY Cytochrome P450 35 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 Coils Coil 324 344 - -
Arst10g03890 503 PANTHER OS08G0105600 PROTEIN 58 498 - -
Arst10g03890 503 FunFam Cytochrome P450 71D8 27 494 - -
Arst10g03890 503 CDD CYP71-like 65 490 - -
Arst10g03890 503 Gene3D Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst10g03890 503 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03890 Arst-Chr10 105596841 105602074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03890 8 494 Cytochrome P450 AT3G26310 42.656 1.14e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03890 - - gmx:102665189 690.263