Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03881 ATGGAGAAGGTGGCTCCTCCGATCTTTATGCACCAAGCACTTCAAAGTCGGTTCTGTGATGTACCGATGACTACTACTGCTACCACGAAGAAGCGCGATCTGTCGTACGACGTCGATAAGAGCAGCTCCAACGGTAATTGGAATCCAAACGCATGGAGCTGGGACAGTGTCAGGTTTATTGGGAAGCCTGTACCGCAGCAAAACGGTGTCGTTTCAGTTGAGGAAGAAACGCTGCGTTTAAATCTCGGTAGCAGTGGTGTTAGTGGCAGCGGCGGAAGCGTTGACCCGAGCGTGTCGCGGCCGAGTAAGAGAGTGCGTTCTGGTTCACCCACCGGAACGGCGTCGTATCCGATGTGCCAGGTGGATAACTGCAAGGAAGATCTGTCAAGTGCTAAAGACTATCACAGAAGGCACAAAGTGTGTGAGCTTCATAGCAAAGCCTCGAAGGCCCCCCTTGGGAACCAAATGCAAAGGTTCTGCCAGCAGTGTAGCAGGTTTCACCCCTTGACGGAGTTTGATGAAGGGAAGCGAAGCTGTAGACGTAGACTGGCTGGGCACAACCGCCGGAGAAGAAAGACCCAACCGGAAGATGTCACGTCGCAGCCTGAGAGTGTGGCTACTGGAAATGCAGAAATCTTCAATTTATTGAGTGCCATAGCAAGTTCACAAGGTAAGTTTGAGGACAGAAGCAAGATTGCGTCACAAGTTCCGGATAAAGACCAGCTTGTTCAGATTCTTAATCGGATACCGTTGCCAGCTGATCTTGCAGCAAAGTTGCTCAATGTTGGCGGTAAAGGTCAAATACAAACTTCATCTTATCATCATGACAAAGTGAACCAGAGCAATTCTGGTCCATTAACGAAGGACTTGCTTGCTGTTCTTTCAACCACTTTATCGGCATCTACTCCCAACTCTCAAAAGAGTAGCCAGAGTAGTGACAGCGAGAAGTCTAGGGCTAGTGCTGACCAAGTTGGTGAAAGTTTACAAATGAGACAACATCCACAAGAATTTGCTTCTGTTGGAGACGAAAGAAGTAGTGGCAGTTCGCAATCTCCAGTTGAAGATTCAGACTTCCCAGAAGTTCAAGTTAATTTGCCACTGCAACTCTTTAGTTCTTCTCCTGAAGTTGGCAACCCGCCAAAATTGACACCTTCGCAAAAGTATTTCTCTTCTGACAGCAGTAATCCTGTGGAAGAGAGGTCACCATCATCTTCCCCTGCTGTGGACAATCAATTCGATTTGCAAGGCGTGGCTAGAGGTTTCAAGGCTGACGGCGTTCCAAGCAGAAGAGAAGTAAATGCAAATAAAGAAGCTAGCCAAAGTCAAAGTTATAATATATCTCTTAATCTCTTTAATGCGCCGAATAGCAGAGTCCAGCCTAGCTCACTTCAAAGTGTTCCATTTCAAGCTGGATATGCATCTTCTGGTTCTGAGCATTCACCTCCAAGTTTGAATTCAGATGCTCAGGATCGCACTGGGAGAATAATGTTCAAACTATTTGACAAAGATCCTAGTCATTTCCCTGGAACACTGCGAACACAGATTTATAATTGGCTTTCTAATAGTCCATCAGATATGGAGAGCTACATTAGGCCGGGCTGTGTGGTACTATCGCTTTATGCTTCAATGTCCTCTGCTGCCTGGGAGCAACTAGAAGAAAACTTCCTGCAACATGTCCATTCTTTAATTCAAAGCAATTCCGACTTTTGGAGAATTGGAAGGTTTCTGGTTCATTCTGGCAATCAGTTAGCATTACACAAAGATGGAAAAATTCACTTATGCAAGCCATGGAGAACATGGAGGTCTCCTGAATTGATATCAGTATCCCCTTTGGCAATTGTTAGTGGACAAGAAACCTCTTTTTCATTGAAGGGTAGAAACCTGTCAAATCCTGGCACCAAGATTCATTGCACAGGTACTGGCGGTTACATGCCCATAAAAGTTGTTGAATCTGCATGTCATGGTATGACCTACGACAAGATAAAGTTGAGTGGCATTAAAGTTCAGGATGCTTCTTCTGGTCATTTGGGTCGCTGTTTTATTGAGGTTGAAAATGGTTTCAAGGGTAACAGTTTTCCAGTGATAATAGCTGATGCAACCATTTGTAAGGAATTGAGACCACTTGAATCTGAATTCAACAAGGAAGAAAATGCAAGTGATGCCATTTCAGATGAGCATGGATATGATCTTGGAAGACCAAGGTCAAGGGAGGAGACTCTACACTTCCTGAATGAGCTTGGGTGGCTATTCCAAAGAGAAAGGTTCTCATATACAGATTTGGTTCCAGATTATTCACTTGACAGATTCAGATTCATACTCACATTTTCCGTGGAAAGAAATTGCTGTATGCTAGTTAAAACACTCTTGGATATGTTGGTTCAAAAATACTTGGAAGGCCAATGGTCGTCAACGGCATCATTGGAGATGCTCAACGCAATCCAACTCCTGAATAGAGCGGTTAAAAGAAAGTATGTGAACATGGTTGATTTGCTCATTCAGTATGCTGTGCCTAGCAAAAATGATGCATCCCGGAAGTACGTATTTCCGCCAAATGTTGCGGGACCTGATGGTATTACGCCATTGCACTTGGCAGCATGCACCTCGTCATCTGAGGGTGTAATTGACTCTCTGACAAATGATCCGCAGGAGATTGGGTTGAACAGCTGGGATTCTCTTCTAGATGCAAATGGGCAGACTCCGCATGCTTATGCCATGATGAGGAATAATCATTCTTATAATGTGCTGGTTGCTCGAAAACTCTCCGATAGAAGAAGAGGCCATGTTTCAGTAACAATTAATAGTGAGATAGAGCATTCATCAATGGACATCGAGCTTAAGCAAAGGCAAAGTGACCAAACCAAAAGAGGTCAGAATTCCTGCACTAAGTGTAGTGCAATGGCGGATGTTCGCTACAGCAGCAGAATTCCTGGTTCACGGAGCTTCGGTCACCACCGACCCTTTATTCATTCGATTCTAGCTATTGCTGCCGTATGTGTCTGTGTCTGTCTGTTCTTGCGAGGACACCCTTGGGTTGGCTCGGTTACACCCTTCAATTGGGAGAAGTTGGATTATGGCACCATATAA 3084 0.4491 MEKVAPPIFMHQALQSRFCDVPMTTTATTKKRDLSYDVDKSSSNGNWNPNAWSWDSVRFIGKPVPQQNGVVSVEEETLRLNLGSSGVSGSGGSVDPSVSRPSKRVRSGSPTGTASYPMCQVDNCKEDLSSAKDYHRRHKVCELHSKASKAPLGNQMQRFCQQCSRFHPLTEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSQPESVATGNAEIFNLLSAIASSQGKFEDRSKIASQVPDKDQLVQILNRIPLPADLAAKLLNVGGKGQIQTSSYHHDKVNQSNSGPLTKDLLAVLSTTLSASTPNSQKSSQSSDSEKSRASADQVGESLQMRQHPQEFASVGDERSSGSSQSPVEDSDFPEVQVNLPLQLFSSSPEVGNPPKLTPSQKYFSSDSSNPVEERSPSSSPAVDNQFDLQGVARGFKADGVPSRREVNANKEASQSQSYNISLNLFNAPNSRVQPSSLQSVPFQAGYASSGSEHSPPSLNSDAQDRTGRIMFKLFDKDPSHFPGTLRTQIYNWLSNSPSDMESYIRPGCVVLSLYASMSSAAWEQLEENFLQHVHSLIQSNSDFWRIGRFLVHSGNQLALHKDGKIHLCKPWRTWRSPELISVSPLAIVSGQETSFSLKGRNLSNPGTKIHCTGTGGYMPIKVVESACHGMTYDKIKLSGIKVQDASSGHLGRCFIEVENGFKGNSFPVIIADATICKELRPLESEFNKEENASDAISDEHGYDLGRPRSREETLHFLNELGWLFQRERFSYTDLVPDYSLDRFRFILTFSVERNCCMLVKTLLDMLVQKYLEGQWSSTASLEMLNAIQLLNRAVKRKYVNMVDLLIQYAVPSKNDASRKYVFPPNVAGPDGITPLHLAACTSSSEGVIDSLTNDPQEIGLNSWDSLLDANGQTPHAYAMMRNNHSYNVLVARKLSDRRRGHVSVTINSEIEHSSMDIELKQRQSDQTKRGQNSCTKCSAMADVRYSSRIPGSRSFGHHRPFIHSILAIAAVCVCVCLFLRGHPWVGSVTPFNWEKLDYGTI 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03881 1027 MobiDBLite consensus disorder prediction 183 205 - -
Arst10g03881 1027 MobiDBLite consensus disorder prediction 298 358 - -
Arst10g03881 1027 MobiDBLite consensus disorder prediction 370 410 - -
Arst10g03881 1027 FunFam Squamosa promoter-binding-like protein 14 111 180 - -
Arst10g03881 1027 ProSiteProfiles Zinc finger SBP-type profile. 116 193 IPR004333 GO:0003677
Arst10g03881 1027 Gene3D - 767 952 IPR036770 -
Arst10g03881 1027 SUPERFAMILY Ankyrin repeat 815 911 IPR036770 -
Arst10g03881 1027 MobiDBLite consensus disorder prediction 461 488 - -
Arst10g03881 1027 MobiDBLite consensus disorder prediction 298 357 - -
Arst10g03881 1027 SUPERFAMILY SBT domain 117 197 IPR036893 GO:0003677|GO:0005634
Arst10g03881 1027 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 853 IPR044817 GO:0003677
Arst10g03881 1027 Pfam SBP domain 119 192 IPR004333 GO:0003677
Arst10g03881 1027 Gene3D - 110 180 IPR036893 GO:0003677|GO:0005634
Arst10g03881 1027 MobiDBLite consensus disorder prediction 82 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03881 Arst-Chr10 105553688 105559143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03881 3 1027 SBP-box Gene Family AT1G20980 50.703 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst10g03881 SBP 7.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03881 - - lang:109360589 1416.75