Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03873 ATGGAACTCTTGTGGAAGCTACCAAACAAGTTTAGTAAGAAGTATGGTAATGGTTTTCCGAATCCAGTGTATCTGAAGCCTGCAGATGACACTGAATGGAGAATAGATTGGACTAATCAAGATGGTGAGATTCAGTTTGAAAAGGGCTGGAGAGAGTTTGCTGCATATTACTCTCTCGAAAATGGCCATTTGTTGTGGTTTGAGTACAACGGAACTTCTAAAATGGAAGTACAAATATTCGACATGAGTTGCCTTGAGATAGAGTATCCTTCCAAGGACCTCATCAATGATGGTAACTTGGCTGGGATCTTGAATGAACAGCCGCAGCCAAAGGAAAAGGCGAATGCAGCACCGAAGCCATCATCTCCTTCTAGAGGTAAAAGAGTGAAATTTACTGTTGAAACTATAGATTTGGAAGATAGTGAAGAAGATAACCAATTGGATAGCCAATCCGAAGAGACACAGCTTAAGAAATTGCCATATGTGAATGATTTCTATCCTGGGACCAGTGGGTTTCATGCTCTGAATGAAGCACTGAAATTCAAATCAGAAAATCCCTTTTTCATAGTCAAGGCAAGGCAAAGCAATGTATCAAGACCAACTGTTAATTTCCAAGCTTCCTTTTTCAGAAAGTATTCTGAAAAGGAGCAGAATGTACAGATAAGGTTTCAGAAGATATTGATTCCTGCAAAGCTGCGCTGTTATCCATATAATTCTCAGGCCATTATCTCTTCCGGTTGGGGTCTTTTCGTTCGAACAAGTACACTACAACCTGGGGATGTTACTATTTTTGAGCTCATCGAAAGAGAAGATCCAGTGCTTGATGTTCATATTTATAGAGCCCAAGCTTTCCAGCCTCAGAGCTCTGGGATTCAATCTCAGAAAGAAGCTAAGAAGTCCAAAAGTCCAAAAGAATCTAAGAACTCCGAGGCACAAAATCCCTCTTTCGTGATCAAGATAACAGAAAGTGATCTATCAAAATCAAGGGCTAAAGTGCCAGTTTCCTTCTTCAACAAGTATTTCAAAAAGAAGGAGCCATATGTAGTGATAAGATTTGATAGCAAGTTGTGGCCTGCAAAGTTGCTGTGTTATCCGGGTAGTGCCTATATCTCCTGCGGTTGGCTGGATTTCACTCTTGACAATAATTTAAAAGCTGGAGATGTTTGTATCCTTGAGCTCGTCAATGGAAAAGATGCATTGCTCGAATGTCGAATTTATAGAGCAGATGGTTAA 1233 0.4023 MELLWKLPNKFSKKYGNGFPNPVYLKPADDTEWRIDWTNQDGEIQFEKGWREFAAYYSLENGHLLWFEYNGTSKMEVQIFDMSCLEIEYPSKDLINDGNLAGILNEQPQPKEKANAAPKPSSPSRGKRVKFTVETIDLEDSEEDNQLDSQSEETQLKKLPYVNDFYPGTSGFHALNEALKFKSENPFFIVKARQSNVSRPTVNFQASFFRKYSEKEQNVQIRFQKILIPAKLRCYPYNSQAIISSGWGLFVRTSTLQPGDVTIFELIEREDPVLDVHIYRAQAFQPQSSGIQSQKEAKKSKSPKESKNSEAQNPSFVIKITESDLSKSRAKVPVSFFNKYFKKKEPYVVIRFDSKLWPAKLLCYPGSAYISCGWLDFTLDNNLKAGDVCILELVNGKDALLECRIYRADG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03873 410 MobiDBLite consensus disorder prediction 287 311 - -
Arst10g03873 410 SUPERFAMILY DNA-binding pseudobarrel domain 6 90 IPR015300 -
Arst10g03873 410 CDD B3_DNA 229 280 IPR003340 GO:0003677
Arst10g03873 410 Pfam B3 DNA binding domain 7 81 IPR003340 GO:0003677
Arst10g03873 410 Pfam B3 DNA binding domain 318 408 IPR003340 GO:0003677
Arst10g03873 410 ProSiteProfiles B3 DNA-binding domain profile. 315 409 IPR003340 GO:0003677
Arst10g03873 410 CDD B3_DNA 314 407 IPR003340 GO:0003677
Arst10g03873 410 Gene3D - 4 84 IPR015300 -
Arst10g03873 410 ProSiteProfiles B3 DNA-binding domain profile. 1 83 IPR003340 GO:0003677
Arst10g03873 410 SUPERFAMILY DNA-binding pseudobarrel domain 310 407 IPR015300 -
Arst10g03873 410 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 6 276 IPR039218 -
Arst10g03873 410 Gene3D - 293 409 IPR015300 -
Arst10g03873 410 Gene3D - 171 284 IPR015300 -
Arst10g03873 410 SMART B3_2 187 282 IPR003340 GO:0003677
Arst10g03873 410 SMART B3_2 316 409 IPR003340 GO:0003677
Arst10g03873 410 SMART B3_2 4 83 IPR003340 GO:0003677
Arst10g03873 410 ProSiteProfiles B3 DNA-binding domain profile. 243 282 IPR003340 GO:0003677
Arst10g03873 410 SUPERFAMILY DNA-binding pseudobarrel domain 181 281 IPR015300 -
Arst10g03873 410 CDD B3_DNA 7 81 IPR003340 GO:0003677
Arst10g03873 410 MobiDBLite consensus disorder prediction 105 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03873 Arst-Chr10 105478776 105484955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03873 280 409 B3 DNA Binding Superfamily AT3G18990 28.244 8.89e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03873 B3 6e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03873 - - adu:107471605 810.831