Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03869 ATGGCTTCATGTAGCTACCAACCAAACAAGCATTCTCCTCCAAAAACTTTGATCTGTTTCTTTAAGATTATTCTCAGACAAAGCCTTCAAGATGGAAATCTTAAGATACCAAACAAGTTCACTAGCAAATATGGTGGTGGTGTGAAAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTCAATGGAAAGTACAATGGACTCAGCATGATGGTGACATTTTATTTGAAAAGGGTTGGAAAGAATTTGCTGCATATTACTGTCTGGATCATGGTCACTTGTTGCGATTTGAGTTCAATGGAACTTCTTGTTTTGAGGTACACATATTTGACATGAGTGGCCTTGAAATACACTATCCTTTCAATAACCGGATCGACGATGATTCAGTTGAGACTTTGAATGAGCTACCACCAGAATGTTGGGGCAGAGAGCGGAAAAGATTGAAAACACCATTATCATTATCATTGCCTTTTACAAGCAAGCAATTGAGAATTGCCACAGAAACTAGAGATATGGAAGGAGGTAGTCAACCTGAAGAGAAAAACATTGAGATGCCAATAATTCCATCTGTCATTCATCGTTCGGATGTTTTTGAGCCTGGGACCTGTGGTTTTCGATGCCTGGAAGAAGCTCAGAAGTTCAACTCAGAAAATCCCTCTTTCATGATCAAGCTAGGGAAAAGTAATCTACAGAGATCAAGGGCTAATTTTAAAGCTTCCTTCTACATAAAGCATTTTGAAAACAAGGAGCAGAATGTAGAGATACGGTATGAAGGCAAGTTGTGGCCTGCAAAGTTGCTCTGTTATCCCGCAGCAGCAGCTGCCTATATCTCGAATGGTTGGCGGCCTTTTAGTCTTGAGAATGATTTAAAAGTTGGAGATGTTTGTGTCTTTGAGCTCATTAATGGAGAAAACCCAGTGCTTGATGCTCATATTTATAGAGCCAATGGTTAA 951 0.3996 MASCSYQPNKHSPPKTLICFFKIILRQSLQDGNLKIPNKFTSKYGGGVKNPVYLKPPDGTQWKVQWTQHDGDILFEKGWKEFAAYYCLDHGHLLRFEFNGTSCFEVHIFDMSGLEIHYPFNNRIDDDSVETLNELPPECWGRERKRLKTPLSLSLPFTSKQLRIATETRDMEGGSQPEEKNIEMPIIPSVIHRSDVFEPGTCGFRCLEEAQKFNSENPSFMIKLGKSNLQRSRANFKASFYIKHFENKEQNVEIRYEGKLWPAKLLCYPAAAAAYISNGWRPFSLENDLKVGDVCVFELINGENPVLDAHIYRANG 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03869 316 Gene3D - 204 315 IPR015300 -
Arst10g03869 316 Gene3D - 15 113 IPR015300 -
Arst10g03869 316 SMART B3_2 220 315 IPR003340 GO:0003677
Arst10g03869 316 SMART B3_2 20 112 IPR003340 GO:0003677
Arst10g03869 316 Pfam B3 DNA binding domain 227 313 IPR003340 GO:0003677
Arst10g03869 316 Pfam B3 DNA binding domain 20 110 IPR003340 GO:0003677
Arst10g03869 316 ProSiteProfiles B3 DNA-binding domain profile. 19 112 IPR003340 GO:0003677
Arst10g03869 316 CDD B3_DNA 19 110 IPR003340 GO:0003677
Arst10g03869 316 ProSiteProfiles B3 DNA-binding domain profile. 257 315 IPR003340 GO:0003677
Arst10g03869 316 PANTHER B3 DOMAIN-CONTAINING 17 301 - -
Arst10g03869 316 SUPERFAMILY DNA-binding pseudobarrel domain 213 315 IPR015300 -
Arst10g03869 316 CDD B3_DNA 218 313 IPR003340 GO:0003677
Arst10g03869 316 SUPERFAMILY DNA-binding pseudobarrel domain 16 112 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03869 Arst-Chr10 105470549 105472758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03869 20 315 B3 DNA Binding Superfamily AT3G18990 28.783 1.46e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03869 B3 5.8e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03869 - - ahf:112717097 643.269