Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03868 ATGCAAAATCAGAAGAAAAGTTTTCCAAAATGGATTGTTCAATGCTCCTTCTTGTGTCCATGCATTTATTTGATCAAGAAATTAGAGAAATTCAGTTTATTAATATCAACTAACCAACAAAAGATAAAAGCTGCATCAACAGCTTCAACAGATGAGAGAGAGAGGCTACCTTACACCGGGCCCACTAAAGACAGATGTCAGAAGATACCAAACAAGTTCACTAGCAAATATGGTGGTGGTGTGAAAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTCAATGGAAAGTACAATGGACTCAGCATGATGGTGACATTTTATTTGAAAAGGGTTGGAAAGAATTTGCTGCATATTACTGTCTGGATCATGGTCACTTGTTGCGATTTGAGTTCAATGGAACTTCTTGTTTTGAGGTACACATATTTGACATGAGTGGCCTTGAAATACACTATCCTTTCAATAACCGGATCGACGATGATTCAGTTGAGACTTTGAATGAGCTACCACCAGAATGTTGGGGCAGAGAGCGGAAAAGATTGAAAACACCATTATCATTATCATTGCCTTTTACAAGCAAGCAATTGAGAATTGCCACAGAAACTAGAGATATGGAAGGAGGTAGTCAACCTGAAGAGAAAAACATTGAGATGCCAATAATTCCATCTGTCATTCATCGTTCGGATGTTTTTGAGCCTGGGACCTGTGGTTTTCGATGCCTGGAAGAAGCTCAGAAGTTCAACTCAGAAAATCCCTCTTTCATGATCAAGCTAGGGAAAAGTAATCTACAGAGATCAAGGGCTAATTTTAAAGCTTCCTTCTACATAAAGCATTTTGAAAACAAGGAGCAGAATGTAGAGATACGGTATGAAGGCAAGTTGTGGCCTGCAAAGTTGCTCTGTTATCCCGCAGCAGCAGCTGCCTATATCTCGAATGGTTGGCGGCCTTTTAGTCTTGAGAATGATTTAAAAGTTGGAGATGTTTGTGTCTTTGAGCTCATTAATGGAGAAAACCCAGTGCTTGATGCTCATATTTATAGAGCCAATGGTTAA 1050 0.3962 MQNQKKSFPKWIVQCSFLCPCIYLIKKLEKFSLLISTNQQKIKAASTASTDERERLPYTGPTKDRCQKIPNKFTSKYGGGVKNPVYLKPPDGTQWKVQWTQHDGDILFEKGWKEFAAYYCLDHGHLLRFEFNGTSCFEVHIFDMSGLEIHYPFNNRIDDDSVETLNELPPECWGRERKRLKTPLSLSLPFTSKQLRIATETRDMEGGSQPEEKNIEMPIIPSVIHRSDVFEPGTCGFRCLEEAQKFNSENPSFMIKLGKSNLQRSRANFKASFYIKHFENKEQNVEIRYEGKLWPAKLLCYPAAAAAYISNGWRPFSLENDLKVGDVCVFELINGENPVLDAHIYRANG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03868 349 ProSiteProfiles B3 DNA-binding domain profile. 290 348 IPR003340 GO:0003677
Arst10g03868 349 CDD B3_DNA 69 143 IPR003340 GO:0003677
Arst10g03868 349 PANTHER B3 DOMAIN-CONTAINING 27 334 - -
Arst10g03868 349 Gene3D - 237 348 IPR015300 -
Arst10g03868 349 Gene3D - 55 146 IPR015300 -
Arst10g03868 349 SUPERFAMILY DNA-binding pseudobarrel domain 246 348 IPR015300 -
Arst10g03868 349 SUPERFAMILY DNA-binding pseudobarrel domain 68 145 IPR015300 -
Arst10g03868 349 CDD B3_DNA 251 346 IPR003340 GO:0003677
Arst10g03868 349 Pfam B3 DNA binding domain 66 143 IPR003340 GO:0003677
Arst10g03868 349 Pfam B3 DNA binding domain 260 346 IPR003340 GO:0003677
Arst10g03868 349 ProSiteProfiles B3 DNA-binding domain profile. 52 145 IPR003340 GO:0003677
Arst10g03868 349 SMART B3_2 58 145 IPR003340 GO:0003677
Arst10g03868 349 SMART B3_2 253 348 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03868 Arst-Chr10 105470547 105473377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03868 55 348 B3 DNA Binding Superfamily AT3G18990 27.761 7.02e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03868 B3 7e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03868 - - adu:110272500 731.48