Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03859 ATGGATTCCTCTAACTTTCAAAGAAACAAGAATTCTCTTTCCACTGTGATCCGTTTCTTTAAGATTGTCCTCAGAAAAAGTCTTGACAATGGATATCTTAAAATGCCAAACAAGTTCTGTAGGAAATATGGTGGAGATATGCCAAATCCAGTGAAACTCCTGCCTCCAGATGGCACTGAATGGAGAATAGATTGGACTAATCGTGATGGTGAGATTTTGTTTGACAAGGGTTGGAAAGAGTTTGCTACATTTTACACTTTGGAGAATGGTCATGTGTTGTGGTTTGAGTACAACGGAACTTCTAACATCAAAGTAAACATATTCGACATGACTGCCCTCGAAATTGATTATCCTTCCAATGGTCGAATCGGTGATGACAACTCGGTTGAGATTTTGGATGAACCGCCGCCACGAAGGGACCGAGGCCGGCCGAAGAAAAAAGTGATAGCAGAACCAAAGCAATCACGTGCTTCTACAAGCAAAAAAATGAAAAGTGCCATCAAAACTAAAGATAAAGATAAAAATCCCAATACACAAAACTTGAAGCTGCATGTCGAGAATGAAAAAGATGGTCAATCTGAAGAGACAGCAGATCTTAAGCTGCCAATAATTCAAGGTGCCAGACCAGATATGGATGTTGTTAGAGAAGCAAAGAAGTTCAAGTCGAAAAATCCTTCTTTTGTCATCAAGATTAAGCAAAAGCACCAAACAGGTTTACCAGCAAATCTTCCAGTTTGTTTCTTCAGGATGTACTTCGAGAACACTAAGCAGTATGCAATTCTACGAGTTGGAAAGAAGCAGTGGCATGCAACATTGATCCATTATCCAAATAGGAAGAATGCCCTTATCTCTCATTGGCGCTTGTTCGTTGAAGAAAATAACTTAAAAGCCGGAGATGTTTGTATCTTTGAGCTCGTTAACAGACAAGGTCCAGAACTTAAGGTTCATATTCGTCGAAGCCATGATTAG 969 0.3973 MDSSNFQRNKNSLSTVIRFFKIVLRKSLDNGYLKMPNKFCRKYGGDMPNPVKLLPPDGTEWRIDWTNRDGEILFDKGWKEFATFYTLENGHVLWFEYNGTSNIKVNIFDMTALEIDYPSNGRIGDDNSVEILDEPPPRRDRGRPKKKVIAEPKQSRASTSKKMKSAIKTKDKDKNPNTQNLKLHVENEKDGQSEETADLKLPIIQGARPDMDVVREAKKFKSKNPSFVIKIKQKHQTGLPANLPVCFFRMYFENTKQYAILRVGKKQWHATLIHYPNRKNALISHWRLFVEENNLKAGDVCIFELVNRQGPELKVHIRRSHD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03859 322 Gene3D - 14 112 IPR015300 -
Arst10g03859 322 Pfam B3 DNA binding domain 20 109 IPR003340 GO:0003677
Arst10g03859 322 Pfam B3 DNA binding domain 243 320 IPR003340 GO:0003677
Arst10g03859 322 MobiDBLite consensus disorder prediction 127 152 - -
Arst10g03859 322 Gene3D - 208 322 IPR015300 -
Arst10g03859 322 PANTHER B3 DOMAIN-CONTAINING 15 309 - -
Arst10g03859 322 SUPERFAMILY DNA-binding pseudobarrel domain 220 320 IPR015300 -
Arst10g03859 322 CDD B3_DNA 243 319 IPR003340 GO:0003677
Arst10g03859 322 SMART B3_2 227 321 IPR003340 GO:0003677
Arst10g03859 322 SMART B3_2 19 111 IPR003340 GO:0003677
Arst10g03859 322 CDD B3_DNA 18 109 IPR003340 GO:0003677
Arst10g03859 322 ProSiteProfiles B3 DNA-binding domain profile. 266 321 IPR003340 GO:0003677
Arst10g03859 322 MobiDBLite consensus disorder prediction 164 195 - -
Arst10g03859 322 SUPERFAMILY DNA-binding pseudobarrel domain 17 118 IPR015300 -
Arst10g03859 322 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
Arst10g03859 322 MobiDBLite consensus disorder prediction 124 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03859 Arst-Chr10 105396507 105398902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03859 19 322 B3 DNA Binding Superfamily AT3G18990 25.595 2.89e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03859 B3 1.3e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03859 - - aip:107621185 609.757