Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03849 ATGGCTTCCTCTAGCTTCCAAAAAAACAAGCATCCTCTTTTCACTGTGATCCGTTTCTTCAAGATTATTCTCAGAAAAAGCCTTGATGATGGATATCTTAAAATACCAACCAAGTTCAGTAGGAAACATGGTAATAATATGCCAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTCAATGGAAAATAGATTGGACTAATGATGGTGATGAGATTCTGTTTCAAAAGGGTTGGAAAGAGTTTGCTACATTTTACACTTTGGATAATGGTCATTTGTTGTGGTTCAAGTACAATGGAACTTCTAACATCAAAGTAAACATATTCGACATGAGTGGCCTCGAAATTGAGTATACTTCCAATGGCCGAATTGATGATAACTTGGTTGAGGCTTTGGAGGAACCGCCGCCACGAAGGGGCCGAGGCCGGCCGAAGAAGAAAGTGATAGCAGAACCAAAGCAATCATGTCCTTCTACAAGTAAAAAAATGAAAAGAGCCATCAAAACTAAAGACATGGATAAAAGCCCCAATACACAAAACTTGAAGCAGCATGTCAAGGTCAAGATTGAAGAAGATAGTCAATCTGAAGAGACAGCAGATATTAAGCAGCCAATAGTTCAATGTGCCAGGCCAGATATAGATGTTATTAGAGAAGCAAGGAAGTTCAAGTCGAAAAATCCTTCTTTCGTGATAAAGATTAGGCAAAAGCACCAAGCAGGATCACCAGCAAGTCTTCCAGTTTGCTTCTTCAGAATGTACTTCGAGAACACGAAGCAGTCTGCAACTCTACATGTTGGAAAGAAGCAGTGGCATGCAACATTGATCTATTATCCATATAAGAAGAGTGCCATTATCTCTAATTGGCGCTTGTTCGTTAAAGAAAATAACATAAAAGCCGGAGATGTTTGCATCTTTGAGCTCATTAACAGACAAGATCCAGAGCTTAAGGTTCATATTCGTCGAAGCCATGATTAG 972 0.3971 MASSSFQKNKHPLFTVIRFFKIILRKSLDDGYLKIPTKFSRKHGNNMPNPVYLKPPDGTQWKIDWTNDGDEILFQKGWKEFATFYTLDNGHLLWFKYNGTSNIKVNIFDMSGLEIEYTSNGRIDDNLVEALEEPPPRRGRGRPKKKVIAEPKQSCPSTSKKMKRAIKTKDMDKSPNTQNLKQHVKVKIEEDSQSEETADIKQPIVQCARPDIDVIREARKFKSKNPSFVIKIRQKHQAGSPASLPVCFFRMYFENTKQSATLHVGKKQWHATLIYYPYKKSAIISNWRLFVKENNIKAGDVCIFELINRQDPELKVHIRRSHD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03849 323 CDD B3_DNA 243 320 IPR003340 GO:0003677
Arst10g03849 323 PANTHER B3 DOMAIN-CONTAINING 17 310 - -
Arst10g03849 323 ProSiteProfiles B3 DNA-binding domain profile. 267 322 IPR003340 GO:0003677
Arst10g03849 323 CDD B3_DNA 18 109 IPR003340 GO:0003677
Arst10g03849 323 SMART B3_2 228 322 IPR003340 GO:0003677
Arst10g03849 323 SMART B3_2 19 111 IPR003340 GO:0003677
Arst10g03849 323 MobiDBLite consensus disorder prediction 132 163 - -
Arst10g03849 323 Gene3D - 211 323 IPR015300 -
Arst10g03849 323 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
Arst10g03849 323 SUPERFAMILY DNA-binding pseudobarrel domain 18 118 IPR015300 -
Arst10g03849 323 Pfam B3 DNA binding domain 242 321 IPR003340 GO:0003677
Arst10g03849 323 Pfam B3 DNA binding domain 20 109 IPR003340 GO:0003677
Arst10g03849 323 Gene3D - 15 112 IPR015300 -
Arst10g03849 323 SUPERFAMILY DNA-binding pseudobarrel domain 221 321 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03849 Arst-Chr10 105315066 105317068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03849 19 323 B3 DNA Binding Superfamily AT3G18990 28.107 7.14e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03849 B3 1.4e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03849 - - aip:107621185 508.064