Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03844 ATGACATCCAAACCAGTCCGTTTCTTCAAGAAACTCCCAAAGAATTTCAGTAGAAAATATGGTGCTTCTTTACCAAAGCCTGTGTTTCTCAAGCCTCCAAATGGAACTGAATGGAAAGTAGATTGGACTATGCATGATGCTGCTGTTGTGTTTGAAAATGGTTGGAAAGAGTTTGTTACATATTACTCTATAGATCATGGGCATGTGTTGAAGTTTGAATATAATGGAAATTCCAAATTGGGGGTTCAAATTTGTGACAAGAGTGGCCTTGAAATAAAGTATCCTTTCAATGTTAATCAACAAGAAAAGGTTAACATTATTGAGATCAGTGATGAAGAAGTTCAAGCGTTCGATGAAATGCCTCAACGACAAAACAATAGAAGGAAATCACCAAAGTCTCAGCTTAACCAAAGGAATGGTAATCAGTCTCAAGGGACAAGTTTTTTGAAGTCAACATCAACATCCATTGAAAAAGAATTAGATGGTGATGAAGAAGATAAAAGTAAGGATAGCATTTCCATTAAAGATAGAAAGGAAACTCAAACAACTTCAAAGGTTACAAGTCCCCTCGCTGAAACAAGTGGTACTCTGAAGGAAGCTGAGAAATTCACCTCAAAAAATCCGTTTTTCATCATAAATGTAACGAAAAAATTTCTGGACCAAAGCAGACCGAATGTACCAATTGACTTTGTCAAAAAGTACCTCAAGCAAAAGCAGTATGCCATGGTAAGGTTTAGAAATAAATTGTGGCCTTTGAAGTTGCTGCCTTATGTAACAAAAAAGGAATCAATCCGGTTGTCCACTGGTTGGAACTTGTTTGCTAAAGCAAGTGAATTGCAAGCTGGAGATGTTTGCATCTTTGAGCTGATCAACATGACAAATTCAGAGTTTGATGTTCACTTCTTTAGATCTCACTCCTAA 921 0.367 MTSKPVRFFKKLPKNFSRKYGASLPKPVFLKPPNGTEWKVDWTMHDAAVVFENGWKEFVTYYSIDHGHVLKFEYNGNSKLGVQICDKSGLEIKYPFNVNQQEKVNIIEISDEEVQAFDEMPQRQNNRRKSPKSQLNQRNGNQSQGTSFLKSTSTSIEKELDGDEEDKSKDSISIKDRKETQTTSKVTSPLAETSGTLKEAEKFTSKNPFFIINVTKKFLDQSRPNVPIDFVKKYLKQKQYAMVRFRNKLWPLKLLPYVTKKESIRLSTGWNLFAKASELQAGDVCIFELINMTNSEFDVHFFRSHS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03844 306 CDD B3_DNA 208 303 IPR003340 GO:0003677
Arst10g03844 306 ProSiteProfiles B3 DNA-binding domain profile. 1 88 IPR003340 GO:0003677
Arst10g03844 306 MobiDBLite consensus disorder prediction 118 191 - -
Arst10g03844 306 Gene3D - 1 89 IPR015300 -
Arst10g03844 306 CDD B3_DNA 12 86 IPR003340 GO:0003677
Arst10g03844 306 SUPERFAMILY DNA-binding pseudobarrel domain 5 89 IPR015300 -
Arst10g03844 306 Gene3D - 190 305 IPR015300 -
Arst10g03844 306 Pfam B3 DNA binding domain 209 304 IPR003340 GO:0003677
Arst10g03844 306 Pfam B3 DNA binding domain 11 87 IPR003340 GO:0003677
Arst10g03844 306 PANTHER B3 DOMAIN-CONTAINING 3 293 - -
Arst10g03844 306 SUPERFAMILY DNA-binding pseudobarrel domain 203 304 IPR015300 -
Arst10g03844 306 MobiDBLite consensus disorder prediction 127 155 - -
Arst10g03844 306 SMART B3_2 8 88 IPR003340 GO:0003677
Arst10g03844 306 SMART B3_2 209 305 IPR003340 GO:0003677
Arst10g03844 306 MobiDBLite consensus disorder prediction 156 182 - -
Arst10g03844 306 ProSiteProfiles B3 DNA-binding domain profile. 209 305 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03844 Arst-Chr10 105301270 105304509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03844 11 303 B3 DNA Binding Superfamily AT3G18990 26.140 7.97e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03844 B3 6.1e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03844 - - adu:107471968 587.415