Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03838 ATGAAGGTTCACTATGATCAATATCAATTCAAAGAGAAAAATAAGAGTATTGCTGATGCTATAAAGAGTAGAGACAGACAAGAGAGACAAGATGGTAACCCCAATTTTGAGGTTGTCATGAGGGATTCATATATTAATGGAGGAAGATGCATGGCCATACCATCTAATTTTGCAAGGAAGTACATGAAGGAAGGAGGGTACCTACTAAGAGTGGAGGATGGGAGGGCATGGAAAGTGATGTTTAAGACTTGGAGTGGAGATGGAGTCCCTTACAAGAAGTACAAATTGCAAAAGGGTTGGGCCAAATTTAGCCAAGGAAACAAGTTACAAAAGGATGATGTTTGTGTCTTTGAGCTTCTTTACAACAACAATTCTAATGGTAGCTCCACTACCATACCAACCTTCAATGTTCTAATTCACCGGAACCACATTGGTAGCAGCTATTCACCATGA 453 0.3974 MKVHYDQYQFKEKNKSIADAIKSRDRQERQDGNPNFEVVMRDSYINGGRCMAIPSNFARKYMKEGGYLLRVEDGRAWKVMFKTWSGDGVPYKKYKLQKGWAKFSQGNKLQKDDVCVFELLYNNNSNGSSTTIPTFNVLIHRNHIGSSYSP 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03838 150 SUPERFAMILY DNA-binding pseudobarrel domain 30 122 IPR015300 -
Arst10g03838 150 Gene3D - 9 144 IPR015300 -
Arst10g03838 150 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 12 142 IPR044837 -
Arst10g03838 150 ProSiteProfiles B3 DNA-binding domain profile. 36 143 IPR003340 GO:0003677
Arst10g03838 150 CDD B3_DNA 34 141 IPR003340 GO:0003677
Arst10g03838 150 SMART B3_2 36 128 IPR003340 GO:0003677
Arst10g03838 150 Pfam B3 DNA binding domain 36 123 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03838 Arst-Chr10 105273081 105274044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03838 30 120 REM Transcription Factor Family AT1G49480 35.870 1.36e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03838 B3 3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03838 - - adu:127743099 317.39