Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g03836 | ATGTCTTCTCAAGAACGTGATGTCGTTCACTTCTTCAAGGTTATTCTTGAAAAGAACCTTCTTGGTGATGGATTTCTGAGATTGCCAAAGAGTTTTGTGCATAAATACTGGAAAGAAATTACGTCACGTTCTGTTTTTCTAAGTCTTCCAAACGGAGCTGAATTGGAAGTTCATTGGTCAAGGGATGAAAACGGTGACGTTTTGTTTGGCCACGGTTGGAAAGAATTTGCACAATACGTGTCTCTCCAAGCGACACAGTTTCTCTTGTTCCGTTACGAAGTGAAAAAAACTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGTTTTATGTTATAGTTTTGGGTTCAAGTGGTTTAGAAATTAAGTACCCTTGTTCTAATTCTGTGTCAAAGAAAAAAAATGATAATGTTAATGTTAATGTTGTTGAAAAAGGGCAAAAGGGTGAAAAAAAGAGTGATGCTTGTTCTTTTGAGTTTGTTAATGGAAAAAGACGAAAATCTCTCTTGTCACCGCTACAATCACCACCTCCACCACCACCACTGGTAATTTCCGATGATGAAACTAGTAGTTTCAAAAGGAAGAAAATTATAAAAGAAGAGCCTGAAGATTACTCTATTGATGGTGAAATCAGTAACACTAAAAGAAAAAGGAGAGCTTCTAGGAGTTTTGATTATATTGCCAAGGAAAAAGATTATGATAACTCAGAAGTGTTGGACAATAAAACCATGAAGAAGTTTCAAGAGAAAGTGAAGAGTAGGTTCCAAACTGGGAATCCCTTTTTTGTATGTGCACTTGGGAAAACCTATTCTGACAGAGACCTCTTGGTTATACCAAGCTATTTTGCTAAACCAATTCTTGGGAAAAGAGAAGGAAATGCAAAGCTCTTTCTTGTTGATGATCCGAAGAAATGTTGGGATGTGCAGATGAGAATTTCTGCTTGCAGGCAATTTATAATTACAAATGGTTGGAAGAAATTCTCAACATTCTATAGTTTGAAACTTGGTGACGCTTGTGTCTTTGAGTTGGTCGATCCAATCGATATTTTATTCAAAGTTCATATTCGTAGTTATGGAGAAGACCCTTTGACTCCTAGCTCTTCTGAATATTCAGAGCAAGAAGGCCCTTCTTATAGGCCTCCTTCTTCTTCTTCTTCACCATTCCTTAAAAAGCATAAAACTTCTAAAGCTAATTTCGGATTCATGCCCAAGAATGAATGA | 1245 | 0.3494 | MSSQERDVVHFFKVILEKNLLGDGFLRLPKSFVHKYWKEITSRSVFLSLPNGAELEVHWSRDENGDVLFGHGWKEFAQYVSLQATQFLLFRYEVKKTNNNNNNNNNNNNNNNNNNNKFYVIVLGSSGLEIKYPCSNSVSKKKNDNVNVNVVEKGQKGEKKSDACSFEFVNGKRRKSLLSPLQSPPPPPPLVISDDETSSFKRKKIIKEEPEDYSIDGEISNTKRKRRASRSFDYIAKEKDYDNSEVLDNKTMKKFQEKVKSRFQTGNPFFVCALGKTYSDRDLLVIPSYFAKPILGKREGNAKLFLVDDPKKCWDVQMRISACRQFIITNGWKKFSTFYSLKLGDACVFELVDPIDILFKVHIRSYGEDPLTPSSSEYSEQEGPSYRPPSSSSSPFLKKHKTSKANFGFMPKNE | 414 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g03836 | 414 | PANTHER | B3 DOMAIN-CONTAINING | 3 | 238 | - | - | |
Arst10g03836 | 414 | ProSiteProfiles | B3 DNA-binding domain profile. | 269 | 365 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | SUPERFAMILY | DNA-binding pseudobarrel domain | 263 | 365 | IPR015300 | - | |
Arst10g03836 | 414 | MobiDBLite | consensus disorder prediction | 370 | 400 | - | - | |
Arst10g03836 | 414 | MobiDBLite | consensus disorder prediction | 370 | 414 | - | - | |
Arst10g03836 | 414 | Gene3D | - | 2 | 102 | IPR015300 | - | |
Arst10g03836 | 414 | MobiDBLite | consensus disorder prediction | 176 | 195 | - | - | |
Arst10g03836 | 414 | Gene3D | - | 248 | 366 | IPR015300 | - | |
Arst10g03836 | 414 | CDD | B3_DNA | 284 | 365 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | ProSiteProfiles | B3 DNA-binding domain profile. | 11 | 126 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | Pfam | B3 DNA binding domain | 278 | 364 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | Pfam | B3 DNA binding domain | 11 | 94 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | CDD | B3_DNA | 10 | 93 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | SMART | B3_2 | 270 | 367 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | SMART | B3_2 | 11 | 101 | IPR003340 | GO:0003677 | |
Arst10g03836 | 414 | SUPERFAMILY | DNA-binding pseudobarrel domain | 5 | 93 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g03836 | Arst-Chr10 | 105241861 | 105244797 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g03836 | 11 | 361 | B3 DNA Binding Superfamily | AT3G18990 | 24.317 | 2.81e-13 | 68.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Arst10g03836 | B3 | 1.5e-11 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g03836 | - | - | ahf:112717071 | 716.457 |