Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03834 ATGGCTTTCTATAACATGTTTTTTAAGGTTCTTATTGATCCCAACCAACTGAGGGAAAACCAACCAAAATGGAAGAAGCCGTCATCACTTCATGAATTGGAGATACCACCAAAGTTTGTAGAGAAAAATTGGAAAAAATTATCAAATCCGTTATTGTTGGAGCTACCAACTGGAGATAAAACAGAAGTAAAATGGGTCAAGAAAAAAAATAATAGCGTTTGGTTAAAGGAAGGATGGAGAAGAGTTGTGGAATTGTTAAAACTAAAGCATGGATGTTTTGTGACTTTTAAATATAATGGGAAATCGAAATTTGAACTCATAGTGTTTCATCCGAATACTTTAGAAATTGATTACTCAAGTGTGAGAGGTTTCTATAACGATGATCATCATCAAGGTGCAAATGAAAATGATGATGATGGTGGTGATGATGATGATGACTCTATTGAGATTATTGCTGAAGAGCCAGAACAATTCAACAACAGAAGCAGAGAAGGAACTTGTAAAAGCATGCTCAAAGAAGTTCATGAAAATCATGACTATATTGTAATTGATGATGATGATGATGATGATGATGAATGGCACTCTAAACCACTCTTGATGAGAAAGAGAACCAAAACAAAAGGAACAAGTAAAAGCATGCTCAAAAAAGTGAGGAGAAATATGAAATGTGATGATAACCGGAGCAAGGCACTGGAGAGGGCTGAAGCCATCTCTTCAAAGCTGAAAAATCCTTCTTTTGTTCGTGATTTGAAGCGTTCATATGTTGATTACGGGATCATGCAAATACCATGTTCATTTTCGGAACAATATTTATATAGATTAAAAGGAAGTGGCACAATTTGGGTTAGTGATAATGAAGACATTAAATGGAGCATCAAATACAGTTACAGTGATTCTCAGAACAGAACAAGTATTTATGGTGATTGGCACAAATTTAGAAAAGAAAACGAGTTAGAAGTTGGTGATGTTTGTGTATTCGAAATGATGACGGAAGTTGAACCCGTTTCCTTCAAAATTTACATCATCCGAGTCAGACAAGAATCATCATCATCTTATCCTCATCAATTCCAAGAGTCCGAAAGGCCCAATAGGCAGGCGAATAATCAATTCGAGCTTCTGATAACAAAATCAAAATTGAAGGCATCAACACTCGTGAAAATACCAAGAAAGTTTATTCGCCAGAATGAAAGATGTGTTGGAAAAGATGTGACACTTAAAGTTGGAAAAGAATTGTGGACTGTGAAAGTGTTGAATTCTGGTTCGTTTTGTAAAGGTTGGATTCAGTTCGCAAGAGAATGCAAATTAGTTGTTGGAGATATTTGTCATTTTGAACTCACTGACCCCACTAATTTTGTGTTCCATGTTTCCATTTCTAGGGAGGAGCATGGTTCATGA 1395 0.3577 MAFYNMFFKVLIDPNQLRENQPKWKKPSSLHELEIPPKFVEKNWKKLSNPLLLELPTGDKTEVKWVKKKNNSVWLKEGWRRVVELLKLKHGCFVTFKYNGKSKFELIVFHPNTLEIDYSSVRGFYNDDHHQGANENDDDGGDDDDDSIEIIAEEPEQFNNRSREGTCKSMLKEVHENHDYIVIDDDDDDDDEWHSKPLLMRKRTKTKGTSKSMLKKVRRNMKCDDNRSKALERAEAISSKLKNPSFVRDLKRSYVDYGIMQIPCSFSEQYLYRLKGSGTIWVSDNEDIKWSIKYSYSDSQNRTSIYGDWHKFRKENELEVGDVCVFEMMTEVEPVSFKIYIIRVRQESSSSYPHQFQESERPNRQANNQFELLITKSKLKASTLVKIPRKFIRQNERCVGKDVTLKVGKELWTVKVLNSGSFCKGWIQFARECKLVVGDICHFELTDPTNFVFHVSISREEHGS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03834 464 Gene3D - 354 462 IPR015300 -
Arst10g03834 464 Gene3D - 223 347 IPR015300 -
Arst10g03834 464 Gene3D - 4 113 IPR015300 -
Arst10g03834 464 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 380 460 IPR044837 -
Arst10g03834 464 CDD B3_DNA 244 343 IPR003340 GO:0003677
Arst10g03834 464 ProSiteProfiles B3 DNA-binding domain profile. 33 112 IPR003340 GO:0003677
Arst10g03834 464 ProSiteProfiles B3 DNA-binding domain profile. 245 345 IPR003340 GO:0003677
Arst10g03834 464 MobiDBLite consensus disorder prediction 127 147 - -
Arst10g03834 464 SUPERFAMILY DNA-binding pseudobarrel domain 242 335 IPR015300 -
Arst10g03834 464 SUPERFAMILY DNA-binding pseudobarrel domain 367 459 IPR015300 -
Arst10g03834 464 CDD B3_DNA 6 109 IPR003340 GO:0003677
Arst10g03834 464 SUPERFAMILY DNA-binding pseudobarrel domain 27 119 IPR015300 -
Arst10g03834 464 SMART B3_2 7 112 IPR003340 GO:0003677
Arst10g03834 464 SMART B3_2 246 345 IPR003340 GO:0003677
Arst10g03834 464 SMART B3_2 370 461 IPR003340 GO:0003677
Arst10g03834 464 ProSiteProfiles B3 DNA-binding domain profile. 370 461 IPR003340 GO:0003677
Arst10g03834 464 CDD B3_DNA 370 459 IPR003340 GO:0003677
Arst10g03834 464 Pfam B3 DNA binding domain 253 343 IPR003340 GO:0003677
Arst10g03834 464 Pfam B3 DNA binding domain 29 108 IPR003340 GO:0003677
Arst10g03834 464 Pfam B3 DNA binding domain 371 459 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03834 Arst-Chr10 105229797 105233162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03834 33 329 B3 DNA Binding Superfamily AT3G18990 26.398 4.31e-20 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03834 B3 1.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03834 - - aip:107621190 783.867