Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03833 ATGGAGATCGATTATTTAAGTTTGAGAAGTATTCGTAATGATCACCGTCAAGAGACAAATAGAAATCATAATGATGATGAAGACGACGAGGATCAATCTATTGAGATAGTTAATGAAAAGCAAAAACAATTCAGAAGAAGAAGTAGAACAGGAGCTTGTAGTGAAAGACTTAAAAGAGTTCAAAGTGATTCAAAAATTGCTCCGAAGAAGGATAATAAACCGTTGGCAGTAGAATTTCAAAGCAAAAAAGCATTGATGAATAGAGCCCAAGTTTTCTGCCTAAACTCAAAATATCCTTGCTTCATACTAGAAATGCAAAGATCTTATATTTCACATGATCTACTGCGTATACCAATCGAGTTTTCGAGAGTGCACTTACATGGGTTAGAGGGAAAAGCCAAAATTGGAGTTAATGGTAACATGAGATGGGATATTGTGTTAAGATTTTGTGGTGATAGAGCTACTTTCAGTGCTGGTTGGAGAAATGTTTCCAATGATTTTGGCTTAAAATTTGGTGATGTTTGTGTTTTTGAGATGATTAAGGACACTCCACTTTCCTTCAACATTTTTCTCATCAGACCCAAACAGCAACCAATAAGCCTTTGCCACCAAAACTTGCCAGACCATTATCAAAGCCTCCCTCAGCCAAAGAAAGTGCAAGGGCAAACCAGTCAATCTAGAAAAAGAAAAAGAAGCAGTGATGGAACTTTCATGAGAATCCGTGACAGAGCTCCCAACATGCAGGATGATGAATTTATCCTTGAAATTAAAGATTATCACCTTAGTGGATCTACTGTGTTCATACCAAATGGATTTTGTCGTAGGCACAAAGATTGTCTTGGAAAACTTGTGAATTTGAAATTTGGAGAAATTTTACGGCCAGTGAAATTGTTAGCACGCGGTGCATTTTCTGAAGGATGGTTGAATTTTGCAAAAGAATGCAAATTGAATGCTGGTGACTTTTGTTCCTTCAAACTTGTTGATGACCAAAATCCTATCTTTGAAGTTTCAACTGTAAAATCAAAATAG 1029 0.3635 MEIDYLSLRSIRNDHRQETNRNHNDDEDDEDQSIEIVNEKQKQFRRRSRTGACSERLKRVQSDSKIAPKKDNKPLAVEFQSKKALMNRAQVFCLNSKYPCFILEMQRSYISHDLLRIPIEFSRVHLHGLEGKAKIGVNGNMRWDIVLRFCGDRATFSAGWRNVSNDFGLKFGDVCVFEMIKDTPLSFNIFLIRPKQQPISLCHQNLPDHYQSLPQPKKVQGQTSQSRKRKRSSDGTFMRIRDRAPNMQDDEFILEIKDYHLSGSTVFIPNGFCRRHKDCLGKLVNLKFGEILRPVKLLARGAFSEGWLNFAKECKLNAGDFCSFKLVDDQNPIFEVSTVKSK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03833 342 Gene3D - 77 196 IPR015300 -
Arst10g03833 342 Gene3D - 238 342 IPR015300 -
Arst10g03833 342 CDD B3_DNA 99 190 IPR003340 GO:0003677
Arst10g03833 342 SUPERFAMILY DNA-binding pseudobarrel domain 94 190 IPR015300 -
Arst10g03833 342 ProSiteProfiles B3 DNA-binding domain profile. 100 195 IPR003340 GO:0003677
Arst10g03833 342 SUPERFAMILY DNA-binding pseudobarrel domain 251 330 IPR015300 -
Arst10g03833 342 CDD B3_DNA 256 329 IPR003340 GO:0003677
Arst10g03833 342 SMART B3_2 101 193 IPR003340 GO:0003677
Arst10g03833 342 SMART B3_2 252 337 IPR003340 GO:0003677
Arst10g03833 342 MobiDBLite consensus disorder prediction 212 239 - -
Arst10g03833 342 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 43 193 IPR044837 -
Arst10g03833 342 Pfam B3 DNA binding domain 102 189 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03833 96 185 B3 DNA Binding Superfamily AT5G18090 34.066 2.08e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03833 B3 3e-10 CL0405