Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03798 ATGACTGGTGATGAAGTTGATAGTAGCTCTGAGTGGAGCTGGGAGCAGGATAAAGCATTTGAGGAAGCCTTGGTAACGCATCCAGACGATGCTCTGGATCGATGGGAGAAAATTGCGGCCGATGTACCGGGGAAAACGGTAGAAGAAATTAAGCAGCATTATGAGCTCTTGGTTGAAGATGTTAATCTGATTGAATCTGGTTGCGTGACTCTACCGTCTTATAATTCTTCTTTGGAAGGCTCAGCAAATCATGCAAGTGATGAAGGAGGTGGCAAGAAGGGGAAGCATGATAGCGAGTCTAATCATGGAACTAAAGCTTCAAGATCGGATCAGGAAAGGCGAAAGGGTATTGCTTGGACAGAAGATGAACACAGGTTGTTTCTTCTTGGCTTGGATAAGTACGGAAAAGGCGACTGGCGAAGCATATCGAGAAACTTTGTCGTGACAAGAACACCGACGCAAGTAGCAAGCCATGCTCAAAAATACTTCATTCGTTTGAACTCCATGAACAAAGATAGAAGGCGATCGAGTATACACGATATCACCAGTGTTAACAATGGTGAAGTTTCAGCACCTCAAGGACCAATTACAGGTCAAACAAATGGTCCTCCACCAAATTCCGCCATCAAATCACCAAAACAACCACCTCCTCCGGCTTCAACCGGTGTTCCGGGAGTAGGACTATACTCTGCTCCTACCATTGGACAACCTATAGGACCCTTAGTATCAGCTGTTGGCACGCCGGTGAATCTTCCGCCCCCTGCACACATTGCATATGGTATTCGAGCCCCAGTTCCCGGCGGCGCTGTTGTTCCCGGTGCACCGGTGAACATGGTTCCCATGACATATCAGATGCCAGGCACATCTGCTTCTCACAGGTGA 882 0.4762 MTGDEVDSSSEWSWEQDKAFEEALVTHPDDALDRWEKIAADVPGKTVEEIKQHYELLVEDVNLIESGCVTLPSYNSSLEGSANHASDEGGGKKGKHDSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGEVSAPQGPITGQTNGPPPNSAIKSPKQPPPPASTGVPGVGLYSAPTIGQPIGPLVSAVGTPVNLPPPAHIAYGIRAPVPGGAVVPGAPVNMVPMTYQMPGTSASHR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03798 293 FunFam transcription factor MYB1R1 117 168 - -
Arst10g03798 293 FunFam Transcription factor SRM1 4 71 - -
Arst10g03798 293 CDD SANT 11 58 IPR001005 -
Arst10g03798 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 115 165 IPR006447 GO:0003677
Arst10g03798 293 ProSiteProfiles SANT domain profile. 119 167 IPR017884 -
Arst10g03798 293 PANTHER TRANSCRIPTION FACTOR KUA1 8 283 - -
Arst10g03798 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 167 IPR017930 -
Arst10g03798 293 CDD SANT 118 163 IPR001005 -
Arst10g03798 293 Pfam Myb-like DNA-binding domain 118 163 IPR001005 -
Arst10g03798 293 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Arst10g03798 293 MobiDBLite consensus disorder prediction 173 226 - -
Arst10g03798 293 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Arst10g03798 293 SMART sant 115 165 IPR001005 -
Arst10g03798 293 SMART sant 8 60 IPR001005 -
Arst10g03798 293 MobiDBLite consensus disorder prediction 208 222 - -
Arst10g03798 293 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Arst10g03798 293 MobiDBLite consensus disorder prediction 78 116 - -
Arst10g03798 293 Gene3D - 5 71 - -
Arst10g03798 293 ProSiteProfiles Myb-like domain profile. 111 163 IPR001005 -
Arst10g03798 293 MobiDBLite consensus disorder prediction 180 207 - -
Arst10g03798 293 Gene3D - 117 169 - -
Arst10g03798 293 SUPERFAMILY Homeodomain-like 113 168 IPR009057 -
Arst10g03798 293 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Arst10g03798 293 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03798 Arst-Chr10 105010944 105015647 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst10g03798 Myb_DNA-binding 6.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03798 - - gmx:100779792 464.922