Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03790 ATGATGGGCACCTTGCTCCAACTCTACCCTTTTCTCTTCCTATTCCTATTCCTTCCAATCCTAAACACAGTTTTATCACAACCTCAACAACTCTTTTATTCTGGATTCAATCATATTCCTGGAACCAACTTATCCCTGACTGGAATAGCGAAAATTGATGACAAAAATGGAATCTTGAAGCTCACAAACGAAACAAGTAGATTAATTGGGCATGCCTTTTACCCAATCCCATTTCAGTTCAAGAATAACAATGGCAGCAGAACCTTCTCATTCTCTTCATCATTTGCAATTGCCATTGTTCCTGAGTATCCAAAGCTTGGTGGCCATGGCTTGGCTTTCACCATTTCAGCTTCCATGGATACTCTCAACCATGCACTTCCAAGCCAGTATCTTGGCCTACTCAACTCAACCAACATTGGAAACTTCTCCAACCACCTTTTTGCCGTCGAATTCGACACTGTCCAGGACTTCGAATTCGGCGACATAAATGATAACCATGTTGGTATAAACATCAACAACTTGGTTTCCAATGTTTCTTGTAATGCAAGTTACTACGCCGAAGGCGAAGGCGAAGGAAAACTTGAAAATCTAAACCTTAAGGGTGGTAAACCACTCATGGTTTGGGTTGATTATGATTCTGTTAAGAGTTTGATAAGTGTTACACTCTCTCCTTCTTCTACAAAACCAAAGAAACCAACTTTGTCATATTCATTGGACCTCTCACCAATCTTTCATGAGAGAATGTATGTTGGATTCTCTGCTTCAACGGGTTTGCTTGCAAGCTCCCATTATGTCTTGGGTTGGAGCTTCAAGATCAATGGAACTGCTCCAACACTTGATCTCGATTCGCTTCCGAAGCTTCCGGGTCCCAAGAAGAAGCAAACTCCCATGGTTGTTGGGGTTTCAGTTGCTACTTCATTCATTGCTCTGTTTTCTCTGTTTCTTGGATTTTACTTGTTCTGGAAAATCAAGAATGCTGATGTTATTGAGCCATGGGAGCTTGAGATTGGGCCTCACAGATACTCATATAAAGAGCTCAAGAAAGCTACAAAGGGTTTCAAGGACAAGGGGCTACTTGGTCAAGGAGGATTCGGCAGAGTTTACAAAGGAACTCTGCCGAATTCCAAGAACCAAGTAGCTGTGAAGAGAGTATCACATGAGTCAAAACAAGGTCTTAGAGAATTTGTGTCAGAAATCGCCAGCATCGGCCGGCTTCGCCACCGGAACTTGGTCCAATTGCTCGGCTGGTGCCGCCGCCGTGGCGACCTCCTACTTGTGTATGATTTCATGGAAAATGGTAGCCTAGACAAGTACTTATTCGACGAGCCGAAAACCATCCTAAGATGGCAAGAAAGGTTCAAGATCATAAAGGATGTTGCTTCAGCACTTTTATATCTCCATGAAGGATATGAACAAGTGGTGATTCATAGAGATGTTAAAGCTAGTAATGTTCTTTTAGATAGTGAAATGAATGGAAGGCTTGGAGATTTTGGTTTAGCAAGATTGTATGAACATGGTGGTCATCCTAGCACAACAAGGGTGGTTGGAACATTAGGTTATTTGGCACCTGAGTTGCCAAGAACAGGAAAAGCCACTCCTAGCACTGATGTTTATGCATTTGGTGCATTAATGCTTGAAGTGGCATGTGGGGTTAGGCCTGTTGATCCAAGAAAGGCACAACATGAGGATTTGGTTTTGGTGGATTGGGTTTGGAAGATGTACAAAGAAGGGAAGCTACTTGATGTTGTGGACCCAAATTTGAATGGTGATTTTGATGAGAGGGAGATTGTTATGGTTCTCAAATTAGGCCTAATGTGTTCAAATGGTGCACCAAATTCTAGGCCTAGCATGAGGCAAGTGACTAGGTATTTGGATGGAGAAAATTTGTTGCCTGATTCATTGATGAAGCCTCATCATAATAACCAAGAGGGTTTTGATGAGTTCTTGAATCCATTTGGGTCTTCTTTTAATAGTTCAGATAATATTGGCATGTATGCTAGTTTTCCTTCATTCACTAATTCCCCTGTTTTTACTCCTATTGGTAGGAGAGAAACAAGTTGA 2061 0.4182 MMGTLLQLYPFLFLFLFLPILNTVLSQPQQLFYSGFNHIPGTNLSLTGIAKIDDKNGILKLTNETSRLIGHAFYPIPFQFKNNNGSRTFSFSSSFAIAIVPEYPKLGGHGLAFTISASMDTLNHALPSQYLGLLNSTNIGNFSNHLFAVEFDTVQDFEFGDINDNHVGININNLVSNVSCNASYYAEGEGEGKLENLNLKGGKPLMVWVDYDSVKSLISVTLSPSSTKPKKPTLSYSLDLSPIFHERMYVGFSASTGLLASSHYVLGWSFKINGTAPTLDLDSLPKLPGPKKKQTPMVVGVSVATSFIALFSLFLGFYLFWKIKNADVIEPWELEIGPHRYSYKELKKATKGFKDKGLLGQGGFGRVYKGTLPNSKNQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMENGSLDKYLFDEPKTILRWQERFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDSEMNGRLGDFGLARLYEHGGHPSTTRVVGTLGYLAPELPRTGKATPSTDVYAFGALMLEVACGVRPVDPRKAQHEDLVLVDWVWKMYKEGKLLDVVDPNLNGDFDEREIVMVLKLGLMCSNGAPNSRPSMRQVTRYLDGENLLPDSLMKPHHNNQEGFDEFLNPFGSSFNSSDNIGMYASFPSFTNSPVFTPIGRRETS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03790 686 CDD STKc_IRAK 359 626 - -
Arst10g03790 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 292 IPR013320 -
Arst10g03790 686 Pfam Legume lectin domain 32 284 IPR001220 GO:0030246
Arst10g03790 686 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Arst10g03790 686 FunFam Lectin-domain containing receptor kinase A4.3 338 429 - -
Arst10g03790 686 SMART serkin_6 353 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03790 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Arst10g03790 686 PANTHER - 47 631 - -
Arst10g03790 686 Gene3D - 30 280 - -
Arst10g03790 686 Gene3D Transferase(Phosphotransferase) domain 1 430 636 - -
Arst10g03790 686 CDD lectin_legume_LecRK_Arcelin_ConA 33 274 IPR001220 GO:0030246
Arst10g03790 686 SUPERFAMILY Protein kinase-like (PK-like) 335 640 IPR011009 -
Arst10g03790 686 FunFam L-type lectin-domain containing receptor kinase S.4 27 278 - -
Arst10g03790 686 Pfam Protein kinase domain 354 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03790 686 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Arst10g03790 686 FunFam L-type lectin-domain containing receptor kinase S.4 430 637 - -
Arst10g03790 686 ProSiteProfiles Protein kinase domain profile. 353 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03790 Arst-Chr10 104956940 104959353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03790 24 685 Receptor kinase-like Gene Family AT3G55550 56.845 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst10g03790 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03790 - - gmx:100801247 944.495