Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03775 ATGGCAAAGTTGCTGGCATTATCGTGCCTCCGGAACGACAGATGGGGACAGCTGTCACCGCGCCCGCACTACCCGTCCATGCCCAGCTACCCCAAGGGAGTCAGCCTCCAGAAGCCGGATTCCGAGCCGGAGAGCACGGCGGTCTTCTCGGTCGTCGGAATGACTTGCGCCGCCTGTGCCGGCTCCGTCGAGAAGGCCGTCAAGCGCCTCCCTGGCATCCGAGAGGCTCTCGTCGATGTCCTCAACAACCGTGCTCAAGTCTTCTTCTTCCCATCCTTCGTTAATGAGGAGACGATTCGAGAGGCAATTGAAGATTGCGGGTTTGAAGCAACGTTACTAACAGATGATGTGACCGACAAATCTGTTCAAGTATGCCGCATACAGATTAAAGGAATGACTTGCACATCTTGCTCCTCCACTGTTGAATCTGCACTACAAGCCCTTCAAGGAGTGATTAAAGCTCAAGTGGCCTTAGCAACTGAAGAAGCTGGAGTTCAGTTCAATCCAAATGTTATTACCTATGAACAAATCATGGATGCCATAGAGGACACCGGCTTTGAAGCAGTACTCATCAGTTCAGGTGAAGACTTGAGCAAGATAGACCTCCAAGTCAAAGGCGCATCGGCCGATCGTTCGATTACACTGCTTGAGGAATCTCTTCAGGCACTCCCCGGGGTCCTAGCAGTAGACATACACCCAGAATTGAATAAAGTTTCAATCTCTTATAAGCCAGACATGACAGGACCAAGGAATTTCATTAAGGTGATTGAGGAAACCGGGTCCGGCCATTTCAAGGCAGAGATATTTCCTCAAGAAGGAGGCCGAAGGGATACTCATAGAAAAAAGGAAATTGATCAGTATTACAGATCTTTCTTGTGGAGTTTGTTGTTTACTATTCCCATCTTTCTAACCTCGATGGTTCTTATGTATATCCCTGGAATTAAGGATGTGCTTGATGCCAAAGTTGTCAATATGCTTACAGTGGGGGAGGTTGCAAGATTGGTGCTCGCGACGCCAGTTCAATTTGTTATAGGCCGGCGATTTTACTCCGGTTCCTACAAATCATTGCGTCGTGGCTCTGCTAACATGGACGTTTTGATTGCATTGGGAACAAATGCGGCATACTTCTATTCGGTCTACACTGTTGCTAGAGCAGCCACCTCTAAGGATTTCAAGGGTACTGATTTCTTTGAGACTAGTGCTATGCTTATCTCATTCATTCTGCTTGGGAAGTATCTTGAGATTTTGGCTAAGGGAAAGACATCAAATGCGATTGCGAAGCTCATGAACTTGACACCAGATACAGCTATATTGCTGACATTGGACAATGAAGGAAATGTCATTAGCGAGGAAGAAATCGACAGCAGGTTAGTTCAGAAGAACGATGTGATCAAAATCATCCCTGGTGCTAAGGTAGCTTCGGATGGATTTGTAATATGGGGCCAGAGTCATGTGAATGAGAGCATGATAACGGGCGAGGCACGGCCTGTGGCAAAGAGGAAAGGGGATACTGTTATTGGAGGAACTGTGAATGAGAATGGAGTCTTGCATATCAAGGCAACACGAGTCGGATCAGAAAGTGCACTTTCGCAGATTGTTCGACTAGTTGAGTCAGCTCAAATGGCCAAGGCACCTGTGCAGAAACTTGCAGACCGCATTTCAAAGTATTTTGTGCCTCTGGTCATCTTGATCTCATTTACAACATGGTTTGCTTGGTTTTTGGCTGGAAGATTCAATGCTTACCCAAAGTCTTGGATACCATCTTCTATGGATAGCTTTCAGCTTGCTTTACAGTTTGGGATCTCTGTCATGGTCATAGCTTGCCCTTGTGCTTTAGGCTTAGCAACGCCAACCGCAGTTATGGTTGGCACTGGAGTTGGTGCTTCTCAGGGTGTGCTAATTAAAGGAGGACAAGCATTAGAAAGTGCTCATAAGGTGAATTGCATTGTTTTTGACAAGACAGGTACTCTCACTGTTGGGAAACCTGTGGTAGTTAACACAAAACTATTCACAAATATGGTACTCCGAGATTTCTACGAACTTGTAGCAGCAGCTGAGGTGAATAGTGAGCATCCACTGGCCAAGGCCGTTGTTGAATATGCGAAAAAATTTAAAGATGAAGAGAATCCTTCATGGCTGGAAGCACAAGATTTTGTTTCTATTACAGGACATGGAGTGAAGGCCACAGTACGAAACCAAGAAATAATTGTTGGTAACAAGAGTTTAATGACAAGTCACAGTATTGCAGTTCCTAGTGATGCTGAAGATATACTTGCTGAAGCTGAAGCAATGGCTCAAACTGGGATTTTAGTATCTATCAATAGGGAAGTAATTGGGGTTTTAGCAATATCCGATCCACTGAAACCAGGTGCCGAAGAAGTCATTTCTATTCTAAAGTCCATGAAAATTAGGAGCGTTATGGTGACAGGGGACAATTGGGGCACTGCTAATTCTATTGCAAGGGAGGTTGGAATAGAGACTGTAATTGCTGAGGCCAAACCAGAGCAAAAAGCAGAGATAGTGAAGGAATTTCAGGCATCTGGCCACACAGTGGCTATGGTAGGGGATGGCATCAACGATTCGCCTGCGCTTGTGGCAGCTGACGTGGGAATGGCGATAGGTGCTGGAACAGACATTGCCATTGAGGCAGCGGACATTGTCCTAATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCTAGAAAAACATTTTCGCGTATTCGCTTGAATTACTTTTGGGCTTTAGGCTATAATCTGCTTGGCATACCAATAGCTGCTGGAGCTCTATTCCCTTCTACAAGATTTCGGTTGCCACCATGGATTGCAGGGGCTGCTATGGCTGCATCCTCTGTTAGTGTTGTTTGTTGTTCTCTGTTGCTTAAATATTACAAGAAACCAAAGAAGCTAGATAACCTTGAGATAAGAAGCATAAGGATCGAGTCATCAAGTGATACCATGCATGGCAATTGA 2979 0.4549 MAKLLALSCLRNDRWGQLSPRPHYPSMPSYPKGVSLQKPDSEPESTAVFSVVGMTCAACAGSVEKAVKRLPGIREALVDVLNNRAQVFFFPSFVNEETIREAIEDCGFEATLLTDDVTDKSVQVCRIQIKGMTCTSCSSTVESALQALQGVIKAQVALATEEAGVQFNPNVITYEQIMDAIEDTGFEAVLISSGEDLSKIDLQVKGASADRSITLLEESLQALPGVLAVDIHPELNKVSISYKPDMTGPRNFIKVIEETGSGHFKAEIFPQEGGRRDTHRKKEIDQYYRSFLWSLLFTIPIFLTSMVLMYIPGIKDVLDAKVVNMLTVGEVARLVLATPVQFVIGRRFYSGSYKSLRRGSANMDVLIALGTNAAYFYSVYTVARAATSKDFKGTDFFETSAMLISFILLGKYLEILAKGKTSNAIAKLMNLTPDTAILLTLDNEGNVISEEEIDSRLVQKNDVIKIIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNENGVLHIKATRVGSESALSQIVRLVESAQMAKAPVQKLADRISKYFVPLVILISFTTWFAWFLAGRFNAYPKSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVNTKLFTNMVLRDFYELVAAAEVNSEHPLAKAVVEYAKKFKDEENPSWLEAQDFVSITGHGVKATVRNQEIIVGNKSLMTSHSIAVPSDAEDILAEAEAMAQTGILVSINREVIGVLAISDPLKPGAEEVISILKSMKIRSVMVTGDNWGTANSIAREVGIETVIAEAKPEQKAEIVKEFQASGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYFWALGYNLLGIPIAAGALFPSTRFRLPPWIAGAAMAASSVSVVCCSLLLKYYKKPKKLDNLEIRSIRIESSSDTMHGN 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03775 992 PRINTS Copper-transporting ATPase 1 signature 46 71 - -
Arst10g03775 992 PRINTS Copper-transporting ATPase 1 signature 101 121 - -
Arst10g03775 992 PRINTS Copper-transporting ATPase 1 signature 147 168 - -
Arst10g03775 992 PRINTS Copper-transporting ATPase 1 signature 72 95 - -
Arst10g03775 992 FunFam Probable copper-transporting ATPase HMA5 757 911 - -
Arst10g03775 992 SUPERFAMILY HMA, heavy metal-associated domain 120 194 IPR036163 GO:0046872
Arst10g03775 992 SUPERFAMILY HMA, heavy metal-associated domain 43 114 IPR036163 GO:0046872
Arst10g03775 992 CDD HMA 127 188 IPR006121 GO:0046872
Arst10g03775 992 ProSiteProfiles Heavy-metal-associated domain profile. 198 264 IPR006121 GO:0046872
Arst10g03775 992 FunFam Copper-transporting ATPase HMA5 44 115 - -
Arst10g03775 992 Gene3D - 123 195 - -
Arst10g03775 992 ProSiteProfiles Heavy-metal-associated domain profile. 45 111 IPR006121 GO:0046872
Arst10g03775 992 Pfam haloacid dehalogenase-like hydrolase 646 868 - -
Arst10g03775 992 SUPERFAMILY Calcium ATPase, transduction domain A 450 536 IPR008250 -
Arst10g03775 992 NCBIfam heavy metal translocating P-type ATPase 363 963 IPR027256 GO:0006812|GO:0016020|GO:0019829
Arst10g03775 992 FunFam Copper-transporting ATPase 1, putative 418 540 - -
Arst10g03775 992 ProSiteProfiles Heavy-metal-associated domain profile. 123 189 IPR006121 GO:0046872
Arst10g03775 992 Gene3D - 657 734 IPR023299 GO:0000166
Arst10g03775 992 Gene3D - 735 785 IPR023299 GO:0000166
Arst10g03775 992 SFLD C1.7: P-type atpase like 632 906 - -
Arst10g03775 992 SFLD C1.7: P-type atpase like 632 906 - -
Arst10g03775 992 Gene3D - 41 112 - -
Arst10g03775 992 MobiDBLite consensus disorder prediction 20 41 - -
Arst10g03775 992 Gene3D - 617 911 IPR023214 -
Arst10g03775 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 398 925 IPR023298 -
Arst10g03775 992 ProSitePatterns Heavy-metal-associated domain. 51 80 IPR017969 GO:0046872
Arst10g03775 992 Pfam Heavy-metal-associated domain 48 109 IPR006121 GO:0046872
Arst10g03775 992 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Arst10g03775 992 NCBIfam HAD-IC family P-type ATPase 403 936 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03775 992 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Arst10g03775 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 652 658 IPR018303 -
Arst10g03775 992 Gene3D - 418 540 - -
Arst10g03775 992 SUPERFAMILY HAD-like 649 960 IPR036412 -
Arst10g03775 992 SFLD p-type atpase 632 906 IPR044492 -
Arst10g03775 992 SFLD p-type atpase 632 906 IPR044492 -
Arst10g03775 992 SUPERFAMILY HMA, heavy metal-associated domain 194 262 IPR036163 GO:0046872
Arst10g03775 992 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 3 981 - -
Arst10g03775 992 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 3 981 - -
Arst10g03775 992 CDD HMA 48 111 IPR006121 GO:0046872
Arst10g03775 992 PRINTS P-type cation-transporting ATPase superfamily signature 801 811 - -
Arst10g03775 992 PRINTS P-type cation-transporting ATPase superfamily signature 779 790 - -
Arst10g03775 992 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Arst10g03775 992 PRINTS P-type cation-transporting ATPase superfamily signature 877 889 - -
Arst10g03775 992 PRINTS P-type cation-transporting ATPase superfamily signature 486 500 - -
Arst10g03775 992 PRINTS P-type cation-transporting ATPase superfamily signature 650 664 - -
Arst10g03775 992 CDD P-type_ATPase_Cu-like 289 960 - -
Arst10g03775 992 NCBIfam copper ion binding protein 127 188 IPR006122 GO:0005507
Arst10g03775 992 NCBIfam copper ion binding protein 49 110 IPR006122 GO:0005507
Arst10g03775 992 FunFam Copper-transporting ATPase HMA5 122 193 - -
Arst10g03775 992 Pfam E1-E2 ATPase 445 628 - -
Arst10g03775 992 Gene3D - 198 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03775 Arst-Chr10 104876404 104881588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03775 3 983 Primary Pumps ATPases AT1G63440 75.354 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03775 K17686 - gmx:100810141 1613.2