Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03770 ATGTCTCTAACTCTAACCACCTTCTCCTCCTCCTTCTTCTTCTTCATCAATTTCATCTTCATCTTCAATCTTCACCATTCAATTGCACAAAGCCAAAACCAACGAGTAACCTTCTCTTCATTCAACAGCTCAGACTCTCCATGGCTTCCAACTCAGAACAAATTCCTTATCTCACCAAACAGAAACTTCACTGCTGGCTTCTTCCCCCTTCCAAATTCCCCAAACCACTTCACCTTCTCCGTTTCGTTCGCCAAAGTTCCCCAATCTTCAAACCCTATCGTTTGGAATGCCACATCCACGAACCTCACCTCCAAATCTTCGCTTCAAATCACCACCAATAATCAAATCCTCCTCAACGGTCTCCCATTATTTGTTAACCCTAACCGCTCATCTTCTTCCCAATCGAACAACGCATCAACGATCCAACTCGTTCTCACCGACGACGGAAACTTGAAATTCGGAGATTCGAACAGCTTCGATGACGCTACCAACACTATCCTTCCCAATCAAGACGTCAACTCAACCGAGCTTGTATCTAACAACGGGAGATTCAAGTTCGTTAGGAAACTGGTGCTCGACGACGATGGGAATCTAAAGATCTATAGCTTCTATCCTGAAGAGAAGAATCAGTGGAAGGTTGTGTGGAGAGCCATATGGGAAATGTGCAGAGTCAAAGGAAGGTGCGGTTCTTATGCTATTTGCGTACCAAGCGATGATTTGAACGTGACTACCACTTCTTGTTTTTGCCCCACCGGGTTCACCGCAAACAACGGTGTTCCCGATCGTGGCTGCACACGGAAGAAACCACTCTCCAAGAACACCGGCTTCATCAGGCTCGATTACGTGAACTACACCGTCTCCGGCGACGGCAGCACCATGAACCAGTTAAGCGGCTCCCAGAATTTCTCTGTCTGCGAAGCCACCTGCAAAACAAACCCCAACTGCTTGGGATTCGGATTCAAGTACGACGGATCGGGTTTCTGCGTTCCGTTAATCGGTAAAGAGCTTCAATACGGTTACTGGTCACCGGGCACCGAGACCGCGTTGTTCATCAAAGTAGATGAATCAGAATCAGAAGAAAGCTCCAATTTCATTGGGCTGACTGAGGTTATGCAAACGAGTTGTCCGGTGAGGATAAGCCTGCCGCAGCCACCGAAGGACTCGAACGCCACCACGAGGAACATCATCATAATCTGCACGCTATTTGCGGCAGAGCTTATTTCTGGTGTGGCTTTCTTCTGGTCTTTCTTAAAGAGATACATCAAATACAGGGACATGGCCACTACTTTAGGCCTTGAACTCTTACCTGCTGGTGGCCCCAAAAGGTTCACTTACTCTGAGCTCAAGGCCGCAACCAATGATTTTTCCAACCTCATTGGAAGAGGTGGATTTGGGGCGGTTTACAGAGGCGAGTTGCCAGACCACCGCGTTGTCGCTGTCAAGGTCTTGAAAAACGTTTCAGGTGGCGATGCGGAGTTCTGGGCCGAGGTGACCATCATTGCCAGAATGCACCACCTCAATTTGGTTCGACTATGGGGATTCTGTGCAGAGAAAGGACAAAGAATTCTCGTGTACGAGTACATCCCTGGTGGCTCATTGGACAAGTACCTCTTCAGGTTGAACAATTCTAGAAAAGGCGACTCAAATACACAGCAAGAGAAGCCTATTTTAGATTGGAATATGAGGTATAGAATTGCTCTTGGTGTAGCCAGAGCTATTGCATATTTGCATGAAGAGTGTTTGGAATGGGTTCTACATTGCGACATCAAACCCGAAAATATTCTTCTAGGCGATGACTTTTGTCCTAAGATATCGGATTTTGGACTCGCTAAGTTAAGGAAAAAAGAGGATATGGTAACAATGTCCAAGAGGAGGGGTACTCCGGGATACATGGCTCCTGAATGGATTACTGCGGATCCAATAACATCAAAGGCTGATGTATATAGTTTTGGAATGGTGTTGTTGGAGCTTGTGAGTGGAGTTAGAAACTTTGAGAGTCCTCAGTCTATGGTTAGAAGTGATGAGTGGTACTTTCCAGGTTGGGCTTTCGATAAGATGTTCAAGGAAATGAGGGTTGAGGACATTCTTGATGGTCATATTAGGGAAATGTATGATACAAGGGCCCATTTTGAAATGGTTAATAGGATGGTGAAGACTGCTATGTGGTGCCTTCAGGATAGGCCTGAGTTGAGGCCTACAATGGGGAAAGTGGCTAAGATGTTGGAAGGAACTGTGGAGATTACTGATCCCAAGAAGCCCACCGTGTTCTTCCTTGGGGAAGAGTAG 2286 0.465 MSLTLTTFSSSFFFFINFIFIFNLHHSIAQSQNQRVTFSSFNSSDSPWLPTQNKFLISPNRNFTAGFFPLPNSPNHFTFSVSFAKVPQSSNPIVWNATSTNLTSKSSLQITTNNQILLNGLPLFVNPNRSSSSQSNNASTIQLVLTDDGNLKFGDSNSFDDATNTILPNQDVNSTELVSNNGRFKFVRKLVLDDDGNLKIYSFYPEEKNQWKVVWRAIWEMCRVKGRCGSYAICVPSDDLNVTTTSCFCPTGFTANNGVPDRGCTRKKPLSKNTGFIRLDYVNYTVSGDGSTMNQLSGSQNFSVCEATCKTNPNCLGFGFKYDGSGFCVPLIGKELQYGYWSPGTETALFIKVDESESEESSNFIGLTEVMQTSCPVRISLPQPPKDSNATTRNIIIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSELKAATNDFSNLIGRGGFGAVYRGELPDHRVVAVKVLKNVSGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRLNNSRKGDSNTQQEKPILDWNMRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSKRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFESPQSMVRSDEWYFPGWAFDKMFKEMRVEDILDGHIREMYDTRAHFEMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITDPKKPTVFFLGEE 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03770 761 Gene3D Transferase(Phosphotransferase) domain 1 528 753 - -
Arst10g03770 761 SMART serkin_6 453 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03770 761 PIRSF SRK 6 189 IPR024171 GO:0004674
Arst10g03770 761 PIRSF SRK 174 761 IPR024171 GO:0004674
Arst10g03770 761 CDD STKc_IRAK 459 743 - -
Arst10g03770 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Arst10g03770 761 Pfam Protein kinase domain 457 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03770 761 SUPERFAMILY Protein kinase-like (PK-like) 435 742 IPR011009 -
Arst10g03770 761 ProSitePatterns Protein kinases ATP-binding region signature. 459 481 IPR017441 GO:0005524
Arst10g03770 761 ProSiteProfiles Protein kinase domain profile. 453 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03770 761 Gene3D Phosphorylase Kinase; domain 1 427 527 - -
Arst10g03770 761 FunFam S-receptor-like serine/threonine-protein kinase 425 527 - -
Arst10g03770 761 Pfam S-locus glycoprotein domain 183 256 IPR000858 GO:0048544
Arst10g03770 761 PANTHER OS07G0415500 PROTEIN 188 756 - -
Arst10g03770 761 FunFam Serine/threonine-protein kinase 528 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03770 Arst-Chr10 104838432 104841622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03770 368 744 Receptor kinase-like Gene Family AT4G18250 37.949 4.17e-78 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst10g03770 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03770 - - ahf:112783437 1464.51