Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03725 ATGACGATGCTGTTATTTCTTGTTCGTTGGTGGAGTTGTGTGTTTGTGCTGCGAAATTCAGGAGTTGTTAATGCTCAGTATTACCGAACTGTTGGAGATAAAATCCTTCCATTCAGCAAAATTATTGTTGATTCTTTGGGACATGGCAACTTTTCTACAATTCAATCTGCCATTGATTCTGTCCCTTCCAACAATAAGTATTGGGTTTCAATCAATGTCAAGCCTGGTATTTACAGGGAGAAAGTGACGATTCCAATTGATAAACCTTACATAATATTGAAGGGAAGTGAAAAGATGAGAACTTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACGTTCCAATCCATGGCTGATAATATCGTCGTCAAATCCATTTCTTTTAGAGTAACTAACCATTTATATTTAATTAATTATATCATTCTCTGCCTATTTTTATTTCATCTCTTAAATATTATTAATATATACAACAATTCAATAAATAAAAATTCCAGGGTTCCTGCATTAGCTGCACTAATAAGTGGAGACAAGTCTTACTTTTATAATGCACTAATAAGTGGAGACAAGTCTTACTTTTATAAAGTTAGATTTTTTGGATTGCAAGATACTTTATGGGACAATCAAGGAAAACATTATTACAAATTTTGTACTATTCAAGGTGCTGTTGATTTTATCTTTGGTGCCGGCCAGTCATTGTTTGAGAGGTGTAACATAAATGTGATTGGAAGGGCATTAGGCGAAGGGTTTGTAGGATATATAACAGCACAAGGAAGAGAACGTCCAAAAGATTCAAATGGGTTTGTATTCAAGAATTGTAGTATCTCTGGAGATGGTTCTACTTTTTTGGGAAGACCTTGGAGACCTTATGCTAGAGTTTTCTTCTACAGTACAAATATGACCAACATTATTCAACCTGCTGGTTGGGATCTGTGGAATTCCTCTCAAAATGAGTAA 963 0.3531 MTMLLFLVRWWSCVFVLRNSGVVNAQYYRTVGDKILPFSKIIVDSLGHGNFSTIQSAIDSVPSNNKYWVSINVKPGIYREKVTIPIDKPYIILKGSEKMRTWVEWDDHNTTAQSPTFQSMADNIVVKSISFRVTNHLYLINYIILCLFLFHLLNIINIYNNSINKNSRVPALAALISGDKSYFYNALISGDKSYFYKVRFFGLQDTLWDNQGKHYYKFCTIQGAVDFIFGAGQSLFERCNINVIGRALGEGFVGYITAQGRERPKDSNGFVFKNCSISGDGSTFLGRPWRPYARVFFYSTNMTNIIQPAGWDLWNSSQNE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03725 320 Gene3D - 38 320 IPR012334 -
Arst10g03725 320 Pfam Pectinesterase 41 134 IPR000070 GO:0030599|GO:0042545
Arst10g03725 320 Pfam Pectinesterase 188 317 IPR000070 GO:0030599|GO:0042545
Arst10g03725 320 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 186 319 - -
Arst10g03725 320 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Arst10g03725 320 SUPERFAMILY Pectin lyase-like 41 317 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03725 Arst-Chr10 104601768 104626753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03725 41 320 Carbohydrate Esterase AT2G19150 38.790 1.09e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03725 - - adu:107471653 629.017