Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03662 ATGAAGAAGAAGCTAGACACCCGTTTTCCTGCGGCTCGGATAAAGAAGATAATGCAAACAGATGAAGATGTTGGAAAGATAGCTCTAGCAGTCCCTGTTCTAGTGTCTAAAGCTTTAGAGCTATTTTTGCAAGATCTTTGTAACCGAACTTATTCAATAACTCTCCAAAGAGGAGCAAAAACCATGACTTCACTGCATTTAAAACATTGTGTACAAAGCTATAATGTTTTTGACTTCTTGAGAGACATTGTTAGCAAGGTTCCTGACTATGGCCATGGCCATGGCCATGGTCATTCTCATTCTGAAGGTGGGGTAGATGATCGTACCCTTCCAAAGAGAAGGAAAGCTGGTGGTGATGATTGTAATGACAGTGATGAAGAGGCTAAGAGGAGTAAGATGTATGAGTTAGGCCACAGTGGTGGCACTGGTAGAGGAAGAGGCCGAGGCAGAGGACGAGGTCGTGGTAGAGGGGCTCGAACTGCTGAAAGAGAGGCCCATCATCATCAGCAAGTTGAATCTGAGCCTTGCTCCTCAGTTCAGCACCCTAGCAAAGACATTCCAAATACTGGCATGTCACTAGACAATTCTCCAGAATCCAAGGAGGTTCCAAAAGAGAACACTGCATGTCATGAGGAAAATAATCAATCTCTGCGTAACATTGATCTAAATGCTAACTTAAATGAGAGCGAGGAGAAGAATACAAGCATGGAAGCTCCGGCCTCGTTGCCTCCAGCCACTTTGCCGCCATCCAGTCTGCCTGAACTGGCAACAGAGATAAATCACGAGGAAATCCCTGGCTGGTCCCTTTCTGATGCGGACAAGATGGCCATTGACACTATGCAGCTTGCAAATCTCGGTAGTCGGATAGATGATGATGAGGATTATGATGAGGAAGGGTGA 900 0.4544 MKKKLDTRFPAARIKKIMQTDEDVGKIALAVPVLVSKALELFLQDLCNRTYSITLQRGAKTMTSLHLKHCVQSYNVFDFLRDIVSKVPDYGHGHGHGHSHSEGGVDDRTLPKRRKAGGDDCNDSDEEAKRSKMYELGHSGGTGRGRGRGRGRGRGRGARTAEREAHHHQQVESEPCSSVQHPSKDIPNTGMSLDNSPESKEVPKENTACHEENNQSLRNIDLNANLNESEEKNTSMEAPASLPPATLPPSSLPELATEINHEEIPGWSLSDADKMAIDTMQLANLGSRIDDDEDYDEEG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03662 299 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 130 - -
Arst10g03662 299 SUPERFAMILY Histone-fold 3 90 IPR009072 GO:0046982
Arst10g03662 299 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Arst10g03662 299 MobiDBLite consensus disorder prediction 209 240 - -
Arst10g03662 299 MobiDBLite consensus disorder prediction 172 196 - -
Arst10g03662 299 MobiDBLite consensus disorder prediction 91 252 - -
Arst10g03662 299 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Arst10g03662 299 MobiDBLite consensus disorder prediction 155 171 - -
Arst10g03662 299 FunFam dr1-associated corepressor homolog 1 86 - -
Arst10g03662 299 MobiDBLite consensus disorder prediction 91 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03662 Arst-Chr10 104187920 104195163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03662 1 289 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.515 6.59e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst10g03662 CBFD_NFYB_HMF 1.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03662 K21752 - gmx:100810093 391.734