LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst10g03659	ATGATGGAAACAAAACTAACCACTACTCTGCATAGATTATTTCTTTGGTTCTTCTTGATGAACATCTTCATCACCATTACCAGAACAAAATCACAATCATCAACGCTAAATTACGTTGGAGATGACTGCCAAAACTCAACAAAACAATCTCTAACAAGTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTACCACAAGCAAGGGCTACAACTATACCACCGTCGGAACCGCCACACGCGATGCCGTCTATGGCTTCTACAACTGCAGAGGTGATGTCACCGGAACCTTCTGCCAGTTTTGCCTCTCCACCGCAGCTTCAGACATTCTCCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCTAACCATGACTTCTATGGTAACCTTACAATAACTCCATCATGGCAAACTCTTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTATATGCAGAGCTTGATAAAGAATGCTACTGCAGAGAGCAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGGTTCATTAGGGAAAAGATATGGATTGGTGCAATGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCTTTGCCTAATTCAGCCAAGAACAATTCAAGCAAGACAAAAACTGTGATCATCATCATAGTGTGTGTGTTGGTGCCAGTAGTGATACTAATTTCTGGCGTCTACTTATTATGGAGGAAGAATCAAATAAATAATGATGCATTTTTGTCAGAGGACACTCCTATATCAGTACATGATAACTCTCAAGAAGGTCAAGGAGACGATTCATTGAATGCCGACCTTCCTGCAGTTCCTCTGATTTGGATTCAACAGAGCACTAATAACTTTTCAAATTCTTGCAAATTAGGGGAAGGTGGTTTTGGTCCTGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTGGTCAAGGTTTGTATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCACCTATTCGATGTGGAAAAACGAAAGCATCTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCACGAAGATTCTAGACTTAAAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTGCTTGATCAAGATATGAATCCAAAAATTTCAGATTTTGGATTAGCAAGAGCATTTGAAAAAGGCCAAGACGAAGAAAATACTAGAAGGGTTATGGGCACCTACGGATATATGGCTCCCGAATATGCCATGGAAGGATTATATTCAGCAAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTCTGGCAAAAAGAGCAGCGGATTCTATTTTTCAGAACATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTAAAGGAGAATGTTTGGAGCTAGTAGATCCTATACTAGAAGATAAATACCCAAGAAATGAAGTTAAAAGGTATATACATATTGGTTTACTGTGTGTACAAGCAGATGCAGTAGATCGACCAACAATGTCTACAATTGTTGTGATGCTAGCAAACGAGACAATGTCACTTCCTAATCCTAACCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGACGAGCCACCATCAAATACTTTTGTTAAGGATCTTTCGGTCAATAAAATATCAGTTTCAAATAGTTTACCTAGGTAA	2010	0.3925	MMETKLTTTLHRLFLWFFLMNIFITITRTKSQSSTLNYVGDDCQNSTKQSLTSGFKTNLNSVLSWLSSDATTSKGYNYTTVGTATRDAVYGFYNCRGDVTGTFCQFCLSTAASDILQHCPNRSSAVIWYNYCILRYSNHDFYGNLTITPSWQTLGTKNSTNSTQELQKAETYMQSLIKNATAESNYLLYAVGEFNAGGSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPNSAKNNSSKTKTVIIIIVCVLVPVVILISGVYLLWRKNQINNDAFLSEDTPISVHDNSQEGQGDDSLNADLPAVPLIWIQQSTNNFSNSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKHLSWKVRMNIIKGIARGLLYLHEDSRLKVIHRDMKASNVLLDQDMNPKISDFGLARAFEKGQDEENTRRVMGTYGYMAPEYAMEGLYSAKSDVFSFGVLLLEIISGKKSSGFYFSEHGQSLLVYSWKLWCKGECLELVDPILEDKYPRNEVKRYIHIGLLCVQADAVDRPTMSTIVVMLANETMSLPNPNHPAFSVGRKIKDEPPSNTFVKDLSVNKISVSNSLPR	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst10g03659	669	Pfam	Salt stress response/antifungal	43	138	IPR002902	-
	Arst10g03659	669	Pfam	Salt stress response/antifungal	159	253	IPR002902	-
	Arst10g03659	669	SUPERFAMILY	Protein kinase-like (PK-like)	336	637	IPR011009	-
	Arst10g03659	669	ProSiteProfiles	Gnk2-homologous domain profile.	147	255	IPR002902	-
	Arst10g03659	669	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	316	426	-	-
	Arst10g03659	669	ProSiteProfiles	Gnk2-homologous domain profile.	37	141	IPR002902	-
	Arst10g03659	669	Pfam	Domain of unknown function (DUF3403)	624	669	IPR021820	GO:0004674
	Arst10g03659	669	ProSiteProfiles	Protein kinase domain profile.	351	637	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g03659	669	FunFam	cysteine-rich receptor-like protein kinase 10	427	629	-	-
	Arst10g03659	669	SMART	serkin_6	351	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g03659	669	Gene3D	Transferase(Phosphotransferase) domain 1	427	632	-	-
	Arst10g03659	669	FunFam	Cysteine-rich receptor-like protein kinase 28	39	140	-	-
	Arst10g03659	669	CDD	STKc_IRAK	357	622	-	-
	Arst10g03659	669	Gene3D	Phosphorylase Kinase; domain 1	315	426	-	-
	Arst10g03659	669	Pfam	Protein tyrosine and serine/threonine kinase	355	621	IPR001245	GO:0004672\|GO:0006468
	Arst10g03659	669	Gene3D	-	36	141	IPR038408	-
	Arst10g03659	669	Gene3D	-	148	255	IPR038408	-
	Arst10g03659	669	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	472	484	IPR008271	GO:0004672\|GO:0006468
	Arst10g03659	669	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	24	660	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst10g03659	Arst-Chr10	104159133	104163655	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst10g03659	5	668	Receptor kinase-like Gene Family	AT4G05200	42.385	8.19e-167	492

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Arst10g03659		PK_Tyr_Ser-Thr	3.2e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst10g03659	-		-	ahf:112718031	1327