Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03650 ATGAGAAAACTGACAAAAGAAGGACTGCAGCAAACAGACAAGAGGGTTGGTATCATGCATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAATGTAGAGTACAAAGCATACGGGATTATGAGCTATCTTGGTTTCGCAAAGCACATCTGTTAAATGCTCTCAATACCTTTATTCTAAATAGCATCCCAGTTCTTGTGACTGTAACTTCATTTGGAATGTTTACTTTACTTGGTGGAGAATTGACTCCTGCAAGGGCATTTACCTCACTATCTCTATTCACAGTTTTGCGCTTTCCATTAAACATGCTACCAAACTTACTAAGTCAGGTAGCAAATGCAAATGTATCGTTGCAAAGGCTGGAAGAATTATTCTTGGCTGAGGAGCGAAATCTAAAGCAAAATCCACCTCTTGTACCAGGACTTCCAGCCATATCAATAAAAAATGGAAACTTTTCATGGGATGCAAAGGCAGAGAAGTCCACACTATCAAATATCAATGTGGAAATACCAATTGGAAGCTTAGTTGCAATAGTTGGTGGTACTGGAGAAGGAAAAACATCACTTATTTCAACAATGATTGGAGAGCTACCTCTTTTAAATGATGGAAATGCTATAATTAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTCAGTTGCAGCTTGCTTATGCTTCTAAACATTTTTACTTATTTCTTTTGTAATAAATTCAAACGAAACAAATACTGCAATTTACTTCTAAATCACATCTTTTTACAGGTACGTGAAAACATATTGTTTGGGTCAGAATTCGAATATGAACGATATTGGAAGGCCATTGATGTCACTGCTTTACAGCATGATCTCAACTTATTACCAGCACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCTTAGCTAGGGCAGTCTATTCAGATTCAGATGTATATATATTCGATGATCCTTTAAGTGCTCTCGATGCTCATGTTGCTCATGAGGTTTTCAAAAACTGTATAAAGGAAGCACTGGGAGGAAAAACAAGGGTTCTTGTCACCAACCAGCTACATCTTCTCCCTCAAGTGGATAAAATTATTCTCCTTAGTGACGGCATGATTAAAGAGCAGGGAACTTTTGAGGAGTTATCAAAGTGTGGGTATCTATTTCAGAGACTAATGGAAAATGCTGGGAAAATGGAACAACAATCAGAGAGTAATGAAGGTAGAGAGGACCATGTCGAGGTTAATGTTTCAACCTCGAGCAATGAGGCACTTGTTCAGATTCCAAACGACACAAGCTATGAGAAGAAGGGAAAATTACGCAAATCAGTGCTTGTTAAGCAAGAAGAGCGGGAGACTGGTGTGGTTAGCTTGAAAGTTTTGGCGAGGTATAAATCTGCATTAGGAGGCCTATGGGTAGTTTTCATACTCTTTGCCTGCTACACATTAACAGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTTTGGACAGATCAAGATTCCACTTCAGATTATAATCCAGTATATTTTCTTGTCGTCTATGCACTTTTCTCCTTTGGACAGGTTGCTGTAACACTTGCAAACTCTTATTGGTTGATCATTTCTAACCTCCGTGCTGCAAAAAGATTGCATGATGCAATGCTAGATAAAATACTTCGGGCCCCAATGGTATTCTTCCAAACTAATCCTGTTGGCCGCATAATTAACAGGTTTGCAAAAGACATGGGAGACATAGACACCATGGTTTCTACTTTGGTGAATCAGTTTATGGGGCAACTCTGGCAGCTACTTTCTACCTTTGTTCTCATTGGCACTGTGAGCACAATATCTCTGTGGGCTATAATGCCATTGCTGATCTTCTTTTATGGAGCTTATATATATTACCAGAGCACCGCTCGAGAAGTGAAGCGTTTGGATTCAATTACAAGATCTCCTGTTTATGCACACTTTGGAGAAGCGTTGAATGGTTTGGCAAGCATACGCGCTTACAAAGCATATGATAGAATGGCTCACATTAATGGAAAATTCATGGATAAAAATATCAGATTTACCCTTGTGAATATTAGTTCAAACCGTTGGCTCACCATAAGGTTAGAATCATTAGGAGGGCTCATGATTTGGTTCATAGCTACATTTGCTGTATTGCAAAATGGAAGATCTGAAAACCAGGCAGCATTTGCATCTACAATGGGCCTTCTTCTCAGTTATACTTTAAACATAACAAGTCTCTTGAGTGGTGTCCTGAGACAAGCAAGTAGAGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGGCACATACATTGATTTGGAAACTGAGGCTCCAAGAATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACATCTGGTTTAGTTGAGTTTGAGAATGTTGTCCTGAGTTACAGGCCTGAACTTCCTCCAGTCTTGCATGGACTGTCCTTTACGGTATTGCCAACCGAGAAGGTTGGGGTAGTTGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCTTTATTCCGTATCGTTGAGCTACAAAGTGGAAGAATCATTATTGATGGTTTTGACATTTCTATGTTTGGACTAGCAGATTTGCGAAGAGTTCTAACTATCATACCTCAATCACCAGTTCTTTTCTCTGGAACTGTTCGCTTCAATCTTGATCCATTTACTGAACACAATGATGCTGACATGTGGCAAGCTTTAGAAAGGGCACATTTGAAGGATGTAATAAGAAGAAATCCACTTGGTCTAGATGCACAGGTCTTGGAGGGTGGAGATAATTTTAGTGTTGGACAGAGGCAACTATTAAGTCTAGCCAGAGCATTGCTTCGAAGATCAAAGGTTCTTGTCCTGGACGAAGCGACTGCTGCTGTTGATGTTAGAACAGATGCTCTTATACAGAAAACCATCCGACAAGAGTTTCAGTCCTGCACAATGCTCATCATTGCACACAGACTAAATACAGTTATTGACTGCAATCGGATTCTATTGCTCGATTCTGGACGGGTCCTTGAGTATGACTCGCCGGACAAACTCTTATCGAATGAAGCAAGTGCATTCTACAAGATGGTTCAAAGTACAGGAGCTGCAAATGCTGAGTATTTATGTAGTTTAGTTTTTGGAAGGATTGTGAACAATTCTAATGAAGAAAACAAGGGACTTGAAAATCAAATGAGACAGTTAGCTTCTTCCAACTGGGCTGCTGCTACACAATGTGCTATAGCTGCAACCCTTTCTTCATTGCATCTTAACCTTCAAAGCCCAAATGAAACTAAAGACAACAAAGATTTCCTCGAAAAAACGAAGGACGCGTTGACAACACTTCAGGAAGTTCTGGAAGGGAAGCATGATGATGTTATACAACAGACACTTGTTAAACACAATGTTCCTACAGAAAGATGGTGGTCTACACTTCATCAATTAGTTGAAGGTTTGTCTGTCTTGATCAAGTTACATCCGAAAAACATTCAACAATTGGAACTTGATTTTGAAAGAAGGTCCTTTCACTGA 3573 0.396 MRKLTKEGLQQTDKRVGIMHEILAAMDTVKCYAWETSFQCRVQSIRDYELSWFRKAHLLNALNTFILNSIPVLVTVTSFGMFTLLGGELTPARAFTSLSLFTVLRFPLNMLPNLLSQVANANVSLQRLEELFLAEERNLKQNPPLVPGLPAISIKNGNFSWDAKAEKSTLSNINVEIPIGSLVAIVGGTGEGKTSLISTMIGELPLLNDGNAIIRGTVAYVPQISWIYNATVSCSLLMLLNIFTYFFCNKFKRNKYCNLLLNHIFLQVRENILFGSEFEYERYWKAIDVTALQHDLNLLPARDFTEIGERGVNISGGQKQRVSLARAVYSDSDVYIFDDPLSALDAHVAHEVFKNCIKEALGGKTRVLVTNQLHLLPQVDKIILLSDGMIKEQGTFEELSKCGYLFQRLMENAGKMEQQSESNEGREDHVEVNVSTSSNEALVQIPNDTSYEKKGKLRKSVLVKQEERETGVVSLKVLARYKSALGGLWVVFILFACYTLTEVLRISSSTWLSVWTDQDSTSDYNPVYFLVVYALFSFGQVAVTLANSYWLIISNLRAAKRLHDAMLDKILRAPMVFFQTNPVGRIINRFAKDMGDIDTMVSTLVNQFMGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYGAYIYYQSTAREVKRLDSITRSPVYAHFGEALNGLASIRAYKAYDRMAHINGKFMDKNIRFTLVNISSNRWLTIRLESLGGLMIWFIATFAVLQNGRSENQAAFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNAVERVGTYIDLETEAPRIIETNRPPPGWPTSGLVEFENVVLSYRPELPPVLHGLSFTVLPTEKVGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGFDISMFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFTEHNDADMWQALERAHLKDVIRRNPLGLDAQVLEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTVIDCNRILLLDSGRVLEYDSPDKLLSNEASAFYKMVQSTGAANAEYLCSLVFGRIVNNSNEENKGLENQMRQLASSNWAAATQCAIAATLSSLHLNLQSPNETKDNKDFLEKTKDALTTLQEVLEGKHDDVIQQTLVKHNVPTERWWSTLHQLVEGLSVLIKLHPKNIQQLELDFERRSFH 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03650 1190 Gene3D - 136 437 IPR027417 -
Arst10g03650 1190 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 1053 - -
Arst10g03650 1190 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 1053 - -
Arst10g03650 1190 FunFam Multidrug resistance-associated protein member 4 796 1048 - -
Arst10g03650 1190 Pfam ABC transporter transmembrane region 1 108 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03650 1190 Pfam ABC transporter transmembrane region 491 743 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03650 1190 SUPERFAMILY ABC transporter transmembrane region 488 792 IPR036640 GO:0005524|GO:0016020
Arst10g03650 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 803 1045 IPR027417 -
Arst10g03650 1190 Coils Coil 111 131 - -
Arst10g03650 1190 ProSitePatterns ABC transporters family signature. 949 963 IPR017871 GO:0005524|GO:0016887
Arst10g03650 1190 SMART AAA_5 179 395 IPR003593 GO:0016887
Arst10g03650 1190 SMART AAA_5 838 1031 IPR003593 GO:0016887
Arst10g03650 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 401 IPR027417 -
Arst10g03650 1190 FunFam ABC transporter C family member 2 455 793 - -
Arst10g03650 1190 SUPERFAMILY ABC transporter transmembrane region 1 132 IPR036640 GO:0005524|GO:0016020
Arst10g03650 1190 Coils Coil 1065 1085 - -
Arst10g03650 1190 ProSitePatterns ABC transporters family signature. 314 328 IPR017871 GO:0005524|GO:0016887
Arst10g03650 1190 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 812 1046 IPR003439 GO:0005524
Arst10g03650 1190 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 492 775 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03650 1190 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 412 IPR003439 GO:0005524
Arst10g03650 1190 CDD ABC_6TM_ABCC_D2 491 787 IPR044726 GO:0140359
Arst10g03650 1190 Pfam ABC transporter 170 341 IPR003439 GO:0005524
Arst10g03650 1190 CDD ABCC_MRP_domain1 152 388 - -
Arst10g03650 1190 Pfam ABC transporter 829 977 IPR003439 GO:0005524
Arst10g03650 1190 Gene3D - 795 1048 IPR027417 -
Arst10g03650 1190 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 120 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03650 1190 CDD ABCC_MRP_domain2 810 1030 - -
Arst10g03650 1190 Gene3D ABC transporter type 1, transmembrane domain 1 135 IPR036640 GO:0005524|GO:0016020
Arst10g03650 1190 Gene3D ABC transporter type 1, transmembrane domain 453 793 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03650 Arst-Chr10 104112607 104122220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03650 136 606 Calmodulin-binding Proteins AT2G36910 23.333 3.37e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03650 - - adu:107471837 2325.82