Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03649 ATGCAAAATCAAGATCCATCTTGGATTGGTTATATCTATGCTTTCTCCATATTTGTTGGAGTGTCACTTGGTGTTCTATGTGAAGCTCAATATTTCCAGAATGTGATGCGTGTTGGTTTTCAGCTTAGATCAACTTTGGTGGCTGCTATATTTAGAAAATCTTTGAGGCTAACTAATGAAGGTCGAAAGAAGTTCTCATCTGGGAAACTTATGAATATGATAACTACAGACGCCAATGCACTACAGCAAATATGTCAACAACTTCATGGACTTTGGTCAGCACCATTCCGTATCATCATAGCAATGGTTCTCCTATACCAGCAACTAGGCGTTGCTTCACTTATTGGATCGCTAATGCTAGTTCTCATTGTCCCACTACAGACATACGTGATTGCCAAAATGAGAAAACTGACAAAAGAAGGACTGCAGCAAACAGACAAGAGGGTTGGTATCATGCATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAATGTAGAGTACAAAGCATACGGGATTATGAGCTATCTTGGTTTCGCAAAGCACATCTGTTAAATGCTCTCAATACCTTTATTCTAAATAGCATCCCAGTTCTTGTGACTGTAACTTCATTTGGAATGTTTACTTTACTTGGTGGAGAATTGACTCCTGCAAGGGCATTTACCTCACTATCTCTATTCACAGTTTTGCGCTTTCCATTAAACATGCTACCAAACTTACTAAGTCAGGTAGCAAATGCAAATGTATCGTTGCAAAGGCTGGAAGAATTATTCTTGGCTGAGGAGCGAAATCTAAAGCAAAATCCACCTCTTGTACCAGGACTTCCAGCCATATCAATAAAAAATGGAAACTTTTCATGGGATGCAAAGGCAGAGAAGTCCACACTATCAAATATCAATGTGGAAATACCAATTGGAAGCTTAGTTGCAATAGTTGGTGGTACTGGAGAAGGAAAAACATCACTTATTTCAACAATGATTGGAGAGCTACCTCTTTTAAATGATGGAAATGCTATAATTAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTACGTGAAAACATATTGTTTGGGTCAGAATTCGAATATGAACGATATTGGAAGGCCATTGATGTCACTGCTTTACAGCATGATCTCAACTTATTACCAGCACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCTTAGCTAGGGCAGTCTATTCAGATTCAGATGTATATATATTCGATGATCCTTTAAGTGCTCTCGATGCTCATGTTGCTCATGAGGTTTTCAAAAACTGTATAAAGGAAGCACTGGGAGGAAAAACAAGGGTTCTTGTCACCAACCAGCTACATCTTCTCCCTCAAGTGGATAAAATTATTCTCCTTAGTGACGGCATGATTAAAGAGCAGGGAACTTTTGAGGAGTTATCAAAGTGTGGGTATCTATTTCAGAGACTAATGGAAAATGCTGGGAAAATGGAACAACAATCAGAGAGTAATGAAGGTAGAGAGGACCATGTCGAGGTTAATGTTTCAACCTCGAGCAATGAGGCACTTGTTCAGATTCCAAACGACACAAGCTATGAGAAGAAGGGAAAATTACGCAAATCAGTGCTTGTTAAGCAAGAAGAGCGGGAGACTGGTGTGGTTAGCTTGAAAGTTTTGGCGAGGTATAAATCTGCATTAGGAGGCCTATGGGTAGTTTTCATACTCTTTGCCTGCTACACATTAACAGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTTTGGACAGATCAAGATTCCACTTCAGATTATAATCCAGTATATTTTCTTGTCGTCTATGCACTTTTCTCCTTTGGACAGGTTGCTGTAACACTTGCAAACTCTTATTGGTTGATCATTTCTAACCTCCGTGCTGCAAAAAGATTGCATGATGCAATGCTAGATAAAATACTTCGGGCCCCAATGGTATTCTTCCAAACTAATCCTGTTGGCCGCATAATTAACAGGTTTGCAAAAGACATGGGAGACATAGACACCATGGTTTCTACTTTGGTGAATCAGTTTATGGGGCAACTCTGGCAGCTACTTTCTACCTTTGTTCTCATTGGCACTGTGAGCACAATATCTCTGTGGGCTATAATGCCATTGCTGATCTTCTTTTATGGAGCTTATATATATTACCAGAGCACCGCTCGAGAAGTGAAGCGTTTGGATTCAATTACAAGATCTCCTGTTTATGCACACTTTGGAGAAGCGTTGAATGGTTTGGCAAGCATACGCGCTTACAAAGCATATGATAGAATGGCTCACATTAATGGAAAATTCATGGATAAAAATATCAGATTTACCCTTGTGAATATTAGTTCAAACCGTTGGCTCACCATAAGGTTAGAATCATTAGGAGGGCTCATGATTTGGTTCATAGCTACATTTGCTGTATTGCAAAATGGAAGATCTGAAAACCAGGCAGCATTTGCATCTACAATGGGCCTTCTTCTCAGTTATACTTTAAACATAACAAGTCTCTTGAGTGGTGTCCTGAGACAAGCAAGTAGAGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGGCACATACATTGATTTGGAAACTGAGGCTCCAAGAATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACATCTGGTTTAGTTGAGTTTGAGAATGTTGTCCTGAGTTACAGGCCTGAACTTCCTCCAGTCTTGCATGGACTGTCCTTTACGGTATTGCCAACCGAGAAGGTTGGGGTAGTTGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCTTTATTCCGTATCGTTGAGCTACAAAGTGGAAGAATCATTATTGATGGTTTTGACATTTCTATGTTTGGACTAGCAGATTTGCGAAGAGTTCTAACTATCATACCTCAATCACCAGTTCTTTTCTCTGGAACTGTTCGCTTCAATCTTGATCCATTTACTGAACACAATGATGCTGACATGTGGCAAGCTTTAGAAAGGGCACATTTGAAGGATGTAATAAGAAGAAATCCACTTGGTCTAGATGCACAGGTCTTGGAGGGTGGAGATAATTTTAGTGTTGGACAGAGGCAACTATTAAGTCTAGCCAGAGCATTGCTTCGAAGATCAAAGGTTCTTGTCCTGGACGAAGCGACTGCTGCTGTTGATGTTAGAACAGATGCTCTTATACAGAAAACCATCCGACAAGAGTTTCAGTCCTGCACAATGCTCATCATTGCACACAGACTAAATACAGTTATTGACTGCAATCGGATTCTATTGCTCGATTCTGGACGGGTCCTTGAGTATGACTCGCCGGACAAACTCTTATCGAATGAAGCAAGTGCATTCTACAAGATGGTTCAAAGTACAGGAGCTGCAAATGCTGAGTATTTATGTAGTTTAGTTTTTGGAAGGATTGTGAACAATTCTAATGAAGAAAACAAGGGACTTGAAAATCAAATGAGACAGTTAGCTTCTTCCAACTGGGCTGCTGCTACACAATGTGCTATAGCTGCAACCCTTTCTTCATTGCATCTTAACCTTCAAAGCCCAAATGAAACTAAAGACAACAAAGATTTCCTCGAAAAAACGAAGGACGCGTTGACAACACTTCAGGAAGTTCTGGAAGGGAAGCATGATGATGTTATACAACAGACACTTGTTAAACACAATGTTCCTACAGAAAGATGGTGGTCTACACTTCATCAATTAGTTGAAGGTTTGTCTGTCTTGATCAAGTTACATCCGAAAAACATTCAACAATTGGAACTTGATTTTGAAAGAAGGTCCTTTCACTGA 3864 0.3991 MQNQDPSWIGYIYAFSIFVGVSLGVLCEAQYFQNVMRVGFQLRSTLVAAIFRKSLRLTNEGRKKFSSGKLMNMITTDANALQQICQQLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLIVPLQTYVIAKMRKLTKEGLQQTDKRVGIMHEILAAMDTVKCYAWETSFQCRVQSIRDYELSWFRKAHLLNALNTFILNSIPVLVTVTSFGMFTLLGGELTPARAFTSLSLFTVLRFPLNMLPNLLSQVANANVSLQRLEELFLAEERNLKQNPPLVPGLPAISIKNGNFSWDAKAEKSTLSNINVEIPIGSLVAIVGGTGEGKTSLISTMIGELPLLNDGNAIIRGTVAYVPQISWIYNATVRENILFGSEFEYERYWKAIDVTALQHDLNLLPARDFTEIGERGVNISGGQKQRVSLARAVYSDSDVYIFDDPLSALDAHVAHEVFKNCIKEALGGKTRVLVTNQLHLLPQVDKIILLSDGMIKEQGTFEELSKCGYLFQRLMENAGKMEQQSESNEGREDHVEVNVSTSSNEALVQIPNDTSYEKKGKLRKSVLVKQEERETGVVSLKVLARYKSALGGLWVVFILFACYTLTEVLRISSSTWLSVWTDQDSTSDYNPVYFLVVYALFSFGQVAVTLANSYWLIISNLRAAKRLHDAMLDKILRAPMVFFQTNPVGRIINRFAKDMGDIDTMVSTLVNQFMGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYGAYIYYQSTAREVKRLDSITRSPVYAHFGEALNGLASIRAYKAYDRMAHINGKFMDKNIRFTLVNISSNRWLTIRLESLGGLMIWFIATFAVLQNGRSENQAAFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNAVERVGTYIDLETEAPRIIETNRPPPGWPTSGLVEFENVVLSYRPELPPVLHGLSFTVLPTEKVGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGFDISMFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFTEHNDADMWQALERAHLKDVIRRNPLGLDAQVLEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTVIDCNRILLLDSGRVLEYDSPDKLLSNEASAFYKMVQSTGAANAEYLCSLVFGRIVNNSNEENKGLENQMRQLASSNWAAATQCAIAATLSSLHLNLQSPNETKDNKDFLEKTKDALTTLQEVLEGKHDDVIQQTLVKHNVPTERWWSTLHQLVEGLSVLIKLHPKNIQQLELDFERRSFH 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03649 1287 Gene3D - 892 1145 IPR027417 -
Arst10g03649 1287 Pfam ABC transporter 926 1074 IPR003439 GO:0005524
Arst10g03649 1287 Gene3D - 269 534 IPR027417 -
Arst10g03649 1287 Pfam ABC transporter 303 438 IPR003439 GO:0005524
Arst10g03649 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 287 509 IPR003439 GO:0005524
Arst10g03649 1287 CDD ABCC_MRP_domain1 285 485 - -
Arst10g03649 1287 ProSitePatterns ABC transporters family signature. 411 425 IPR017871 GO:0005524|GO:0016887
Arst10g03649 1287 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 11 1150 - -
Arst10g03649 1287 SUPERFAMILY ABC transporter transmembrane region 8 265 IPR036640 GO:0005524|GO:0016020
Arst10g03649 1287 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 11 1150 - -
Arst10g03649 1287 CDD ABC_6TM_ABCC_D2 588 884 IPR044726 GO:0140359
Arst10g03649 1287 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 589 872 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03649 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 1142 IPR027417 -
Arst10g03649 1287 FunFam ABC transporter C family member 2 279 525 - -
Arst10g03649 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 508 IPR027417 -
Arst10g03649 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 909 1143 IPR003439 GO:0005524
Arst10g03649 1287 FunFam Multidrug resistance-associated protein member 4 893 1145 - -
Arst10g03649 1287 Pfam ABC transporter transmembrane region 588 840 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03649 1287 Pfam ABC transporter transmembrane region 3 241 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03649 1287 SUPERFAMILY ABC transporter transmembrane region 585 889 IPR036640 GO:0005524|GO:0016020
Arst10g03649 1287 CDD ABCC_MRP_domain2 907 1127 - -
Arst10g03649 1287 FunFam ABC transporter C family member 2 552 890 - -
Arst10g03649 1287 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 253 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03649 1287 CDD ABC_6TM_ABCC_D1 3 261 IPR044746 GO:0140359
Arst10g03649 1287 Coils Coil 1162 1182 - -
Arst10g03649 1287 Gene3D ABC transporter type 1, transmembrane domain 550 890 IPR036640 GO:0005524|GO:0016020
Arst10g03649 1287 Gene3D ABC transporter type 1, transmembrane domain 1 268 IPR036640 GO:0005524|GO:0016020
Arst10g03649 1287 Coils Coil 244 264 - -
Arst10g03649 1287 ProSitePatterns ABC transporters family signature. 1046 1060 IPR017871 GO:0005524|GO:0016887
Arst10g03649 1287 FunFam ABC transporter C family member 2 1 270 - -
Arst10g03649 1287 SMART AAA_5 312 492 IPR003593 GO:0016887
Arst10g03649 1287 SMART AAA_5 935 1128 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03649 Arst-Chr10 104110570 104122220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03649 269 703 Calmodulin-binding Proteins AT2G36910 24.230 2.78e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03649 - - adu:107471837 2488.76