Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g03648 | ATGCAAAATCAAGATCCATCTTGGATTGGTTATATCTATGCTTTCTCCATATTTGTTGGAGTGTCACTTGGTGTTCTATGTGAAGCTCAATATTTCCAGAATGTGATGCGTGTTGGTTTTCAGCTTAGATCAACTTTGGTGGCTGCTATATTTAGAAAATCTTTGAGGCTAACTAATGAAGGTCGAAAGAAGTTCTCATCTGGGAAACTTATGAATATGATAACTACAGACGCCAATGCACTACAGCAAATATGTCAACAACTTCATGGACTTTGGTCAGCACCATTCCGTATCATCATAGCAATGGTTCTCCTATACCAGCAACTAGGCGTTGCTTCACTTATTGGATCGCTAATGCTAGTTCTCATTGTCCCACTACAGACATACGTGATTGCCAAAATGAGAAAACTGACAAAAGAAGGACTGCAGCAAACAGACAAGAGGGTTGGTATCATGCATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAATGTAGAGTACAAAGCATACGGGATTATGAGCTATCTTGGTTTCGCAAAGCACATCTGTTAAATGCTCTCAATACCTTTATTCTAAATAGCATCCCAGTTCTTGTGACTGTAACTTCATTTGGAATGTTTACTTTACTTGGTGGAGAATTGACTCCTGCAAGGGCATTTACCTCACTATCTCTATTCACAGTTTTGCGCTTTCCATTAAACATGCTACCAAACTTACTAAGTCAGGTAGCAAATGCAAATGTATCGTTGCAAAGGCTGGAAGAATTATTCTTGGCTGAGGAGCGAAATCTAAAGCAAAATCCACCTCTTGTACCAGGACTTCCAGCCATATCAATAAAAAATGGAAACTTTTCATGGGATGCAAAGGCAGAGAAGTCCACACTATCAAATATCAATGTGGAAATACCAATTGGAAGCTTAGTTGCAATAGTTGGTGGTACTGGAGAAGGAAAAACATCACTTATTTCAACAATGATTGGAGAGCTACCTCTTTTAAATGATGGAAATGCTATAATTAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTCAGTTGCAGCTTGCTTATGCTTCTAAACATTTTTACTTATTTCTTTTGTAATAAATTCAAACGAAACAAATACTGCAATTTACTTCTAAATCACATCTTTTTACAGGTACGTGAAAACATATTGTTTGGGTCAGAATTCGAATATGAACGATATTGGAAGGCCATTGATGTCACTGCTTTACAGCATGATCTCAACTTATTACCAGCACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCTTAGCTAGGGCAGTCTATTCAGATTCAGATGTATATATATTCGATGATCCTTTAAGTGCTCTCGATGCTCATGTTGCTCATGAGGTTTTCAAAAACTGTATAAAGGAAGCACTGGGAGGAAAAACAAGGGTTCTTGTCACCAACCAGCTACATCTTCTCCCTCAAGTGGATAAAATTATTCTCCTTAGTGACGGCATGATTAAAGAGCAGGGAACTTTTGAGGAGTTATCAAAGTGTGGGTATCTATTTCAGAGACTAATGGAAAATGCTGGGAAAATGGAACAACAATCAGAGAGTAATGAAGGTAGAGAGGACCATGTCGAGGTTAATGTTTCAACCTCGAGCAATGAGGCACTTGTTCAGATTCCAAACGACACAAGCTATGAGAAGAAGGGAAAATTACGCAAATCAGTGCTTGTTAAGCAAGAAGAGCGGGAGACTGGTGTGGTTAGCTTGAAAGTTTTGGCGAGGTATAAATCTGCATTAGGAGGCCTATGGGTAGTTTTCATACTCTTTGCCTGCTACACATTAACAGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTTTGGACAGATCAAGATTCCACTTCAGATTATAATCCAGTATATTTTCTTGTCGTCTATGCACTTTTCTCCTTTGGACAGGTTGCTGTAACACTTGCAAACTCTTATTGGTTGATCATTTCTAACCTCCGTGCTGCAAAAAGATTGCATGATGCAATGCTAGATAAAATACTTCGGGCCCCAATGGTATTCTTCCAAACTAATCCTGTTGGCCGCATAATTAACAGGTTTGCAAAAGACATGGGAGACATAGACACCATGGTTTCTACTTTGGTGAATCAGTTTATGGGGCAACTCTGGCAGCTACTTTCTACCTTTGTTCTCATTGGCACTGTGAGCACAATATCTCTGTGGGCTATAATGCCATTGCTGATCTTCTTTTATGGAGCTTATATATATTACCAGAGCACCGCTCGAGAAGTGAAGCGTTTGGATTCAATTACAAGATCTCCTGTTTATGCACACTTTGGAGAAGCGTTGAATGGTTTGGCAAGCATACGCGCTTACAAAGCATATGATAGAATGGCTCACATTAATGGAAAATTCATGGATAAAAATATCAGATTTACCCTTGTGAATATTAGTTCAAACCGTTGGCTCACCATAAGGTTAGAATCATTAGGAGGGCTCATGATTTGGTTCATAGCTACATTTGCTGTATTGCAAAATGGAAGATCTGAAAACCAGGCAGCATTTGCATCTACAATGGGCCTTCTTCTCAGTTATACTTTAAACATAACAAGTCTCTTGAGTGGTGTCCTGAGACAAGCAAGTAGAGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGGCACATACATTGATTTGGAAACTGAGGCTCCAAGAATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACATCTGGTTTAGTTGAGTTTGAGAATGTTGTCCTGAGTTACAGGCCTGAACTTCCTCCAGTCTTGCATGGACTGTCCTTTACGGTATTGCCAACCGAGAAGGTTGGGGTAGTTGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCTTTATTCCGTATCGTTGAGCTACAAAGTGGAAGAATCATTATTGATGGTTTTGACATTTCTATGTTTGGACTAGCAGATTTGCGAAGAGTTCTAACTATCATACCTCAATCACCAGTTCTTTTCTCTGGAACTGTTCGCTTCAATCTTGATCCATTTACTGAACACAATGATGCTGACATGTGGCAAGCTTTAGAAAGGGCACATTTGAAGGATGTAATAAGAAGAAATCCACTTGGTCTAGATGCACAGGTCTTGGAGGGTGGAGATAATTTTAGTGTTGGACAGAGGCAACTATTAAGTCTAGCCAGAGCATTGCTTCGAAGATCAAAGGTTCTTGTCCTGGACGAAGCGACTGCTGCTGTTGATGTTAGAACAGATGCTCTTATACAGAAAACCATCCGACAAGAGTTTCAGTCCTGCACAATGCTCATCATTGCACACAGACTAAATACAGTTATTGACTGCAATCGGATTCTATTGCTCGATTCTGGACGGGTCCTTGAGTATGACTCGCCGGACAAACTCTTATCGAATGAAGCAAGTGCATTCTACAAGATGGTTCAAAGTACAGGAGCTGCAAATGCTGAGTATTTATGTAGTTTAGTTTTTGGAAGGATTGTGAACAATTCTAATGAAGAAAACAAGGGACTTGAAAATCAAATGAGACAGTTAGCTTCTTCCAACTGGGCTGCTGCTACACAATGTGCTATAGCTGCAACCCTTTCTTCATTGCATCTTAACCTTCAAAGCCCAAATGAAACTAAAGACAACAAAGATTTCCTCGAAAAAACGAAGGACGCGTTGACAACACTTCAGGAAGTTCTGGAAGGGAAGCATGATGATGTTATACAACAGACACTTGTTAAACACAATGTTCCTACAGAAAGATGGTGGTCTACACTTCATCAATTAGTTGAAGGTTTGTCTGTCTTGATCAAGTTACATCCGAAAAACATTCAACAATTGGAACTTGATTTTGAAAGAAGGTCCTTTCACTGA | 3972 | 0.3958 | MQNQDPSWIGYIYAFSIFVGVSLGVLCEAQYFQNVMRVGFQLRSTLVAAIFRKSLRLTNEGRKKFSSGKLMNMITTDANALQQICQQLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLIVPLQTYVIAKMRKLTKEGLQQTDKRVGIMHEILAAMDTVKCYAWETSFQCRVQSIRDYELSWFRKAHLLNALNTFILNSIPVLVTVTSFGMFTLLGGELTPARAFTSLSLFTVLRFPLNMLPNLLSQVANANVSLQRLEELFLAEERNLKQNPPLVPGLPAISIKNGNFSWDAKAEKSTLSNINVEIPIGSLVAIVGGTGEGKTSLISTMIGELPLLNDGNAIIRGTVAYVPQISWIYNATVSCSLLMLLNIFTYFFCNKFKRNKYCNLLLNHIFLQVRENILFGSEFEYERYWKAIDVTALQHDLNLLPARDFTEIGERGVNISGGQKQRVSLARAVYSDSDVYIFDDPLSALDAHVAHEVFKNCIKEALGGKTRVLVTNQLHLLPQVDKIILLSDGMIKEQGTFEELSKCGYLFQRLMENAGKMEQQSESNEGREDHVEVNVSTSSNEALVQIPNDTSYEKKGKLRKSVLVKQEERETGVVSLKVLARYKSALGGLWVVFILFACYTLTEVLRISSSTWLSVWTDQDSTSDYNPVYFLVVYALFSFGQVAVTLANSYWLIISNLRAAKRLHDAMLDKILRAPMVFFQTNPVGRIINRFAKDMGDIDTMVSTLVNQFMGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYGAYIYYQSTAREVKRLDSITRSPVYAHFGEALNGLASIRAYKAYDRMAHINGKFMDKNIRFTLVNISSNRWLTIRLESLGGLMIWFIATFAVLQNGRSENQAAFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNAVERVGTYIDLETEAPRIIETNRPPPGWPTSGLVEFENVVLSYRPELPPVLHGLSFTVLPTEKVGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGFDISMFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFTEHNDADMWQALERAHLKDVIRRNPLGLDAQVLEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTVIDCNRILLLDSGRVLEYDSPDKLLSNEASAFYKMVQSTGAANAEYLCSLVFGRIVNNSNEENKGLENQMRQLASSNWAAATQCAIAATLSSLHLNLQSPNETKDNKDFLEKTKDALTTLQEVLEGKHDDVIQQTLVKHNVPTERWWSTLHQLVEGLSVLIKLHPKNIQQLELDFERRSFH | 1323 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g03648 | 1323 | Pfam | ABC transporter | 962 | 1110 | IPR003439 | GO:0005524 | |
Arst10g03648 | 1323 | Coils | Coil | 1198 | 1218 | - | - | |
Arst10g03648 | 1323 | Gene3D | - | 928 | 1181 | IPR027417 | - | |
Arst10g03648 | 1323 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 945 | 1179 | IPR003439 | GO:0005524 | |
Arst10g03648 | 1323 | CDD | ABCC_MRP_domain2 | 943 | 1163 | - | - | |
Arst10g03648 | 1323 | ProSitePatterns | ABC transporters family signature. | 1082 | 1096 | IPR017871 | GO:0005524|GO:0016887 | |
Arst10g03648 | 1323 | SUPERFAMILY | ABC transporter transmembrane region | 8 | 265 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g03648 | 1323 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 275 | 534 | IPR027417 | - | |
Arst10g03648 | 1323 | FunFam | ABC transporter C family member 2 | 588 | 926 | - | - | |
Arst10g03648 | 1323 | SUPERFAMILY | ABC transporter transmembrane region | 621 | 925 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g03648 | 1323 | Pfam | ABC transporter | 303 | 474 | IPR003439 | GO:0005524 | |
Arst10g03648 | 1323 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 11 | 1186 | - | - | |
Arst10g03648 | 1323 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 11 | 1186 | - | - | |
Arst10g03648 | 1323 | Pfam | ABC transporter transmembrane region | 624 | 876 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g03648 | 1323 | Pfam | ABC transporter transmembrane region | 3 | 241 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g03648 | 1323 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 625 | 908 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g03648 | 1323 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 287 | 545 | IPR003439 | GO:0005524 | |
Arst10g03648 | 1323 | Gene3D | ABC transporter type 1, transmembrane domain | 586 | 926 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g03648 | 1323 | Gene3D | ABC transporter type 1, transmembrane domain | 1 | 268 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g03648 | 1323 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 1 | 253 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g03648 | 1323 | CDD | ABC_6TM_ABCC_D1 | 3 | 261 | IPR044746 | GO:0140359 | |
Arst10g03648 | 1323 | FunFam | Multidrug resistance-associated protein member 4 | 929 | 1181 | - | - | |
Arst10g03648 | 1323 | CDD | ABCC_MRP_domain1 | 285 | 521 | - | - | |
Arst10g03648 | 1323 | FunFam | ABC transporter C family member 2 | 1 | 270 | - | - | |
Arst10g03648 | 1323 | Gene3D | - | 269 | 570 | IPR027417 | - | |
Arst10g03648 | 1323 | Coils | Coil | 244 | 264 | - | - | |
Arst10g03648 | 1323 | ProSitePatterns | ABC transporters family signature. | 447 | 461 | IPR017871 | GO:0005524|GO:0016887 | |
Arst10g03648 | 1323 | CDD | ABC_6TM_ABCC_D2 | 624 | 920 | IPR044726 | GO:0140359 | |
Arst10g03648 | 1323 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 936 | 1178 | IPR027417 | - | |
Arst10g03648 | 1323 | SMART | AAA_5 | 312 | 528 | IPR003593 | GO:0016887 | |
Arst10g03648 | 1323 | SMART | AAA_5 | 971 | 1164 | IPR003593 | GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g03648 | Arst-Chr10 | 104110570 | 104122220 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g03648 | 269 | 739 | Calmodulin-binding Proteins | AT2G36910 | 23.333 | 2.17e-22 | 102 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g03648 | - | - | adu:107471837 | 2582.36 |