Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03648 ATGCAAAATCAAGATCCATCTTGGATTGGTTATATCTATGCTTTCTCCATATTTGTTGGAGTGTCACTTGGTGTTCTATGTGAAGCTCAATATTTCCAGAATGTGATGCGTGTTGGTTTTCAGCTTAGATCAACTTTGGTGGCTGCTATATTTAGAAAATCTTTGAGGCTAACTAATGAAGGTCGAAAGAAGTTCTCATCTGGGAAACTTATGAATATGATAACTACAGACGCCAATGCACTACAGCAAATATGTCAACAACTTCATGGACTTTGGTCAGCACCATTCCGTATCATCATAGCAATGGTTCTCCTATACCAGCAACTAGGCGTTGCTTCACTTATTGGATCGCTAATGCTAGTTCTCATTGTCCCACTACAGACATACGTGATTGCCAAAATGAGAAAACTGACAAAAGAAGGACTGCAGCAAACAGACAAGAGGGTTGGTATCATGCATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAATGTAGAGTACAAAGCATACGGGATTATGAGCTATCTTGGTTTCGCAAAGCACATCTGTTAAATGCTCTCAATACCTTTATTCTAAATAGCATCCCAGTTCTTGTGACTGTAACTTCATTTGGAATGTTTACTTTACTTGGTGGAGAATTGACTCCTGCAAGGGCATTTACCTCACTATCTCTATTCACAGTTTTGCGCTTTCCATTAAACATGCTACCAAACTTACTAAGTCAGGTAGCAAATGCAAATGTATCGTTGCAAAGGCTGGAAGAATTATTCTTGGCTGAGGAGCGAAATCTAAAGCAAAATCCACCTCTTGTACCAGGACTTCCAGCCATATCAATAAAAAATGGAAACTTTTCATGGGATGCAAAGGCAGAGAAGTCCACACTATCAAATATCAATGTGGAAATACCAATTGGAAGCTTAGTTGCAATAGTTGGTGGTACTGGAGAAGGAAAAACATCACTTATTTCAACAATGATTGGAGAGCTACCTCTTTTAAATGATGGAAATGCTATAATTAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTCAGTTGCAGCTTGCTTATGCTTCTAAACATTTTTACTTATTTCTTTTGTAATAAATTCAAACGAAACAAATACTGCAATTTACTTCTAAATCACATCTTTTTACAGGTACGTGAAAACATATTGTTTGGGTCAGAATTCGAATATGAACGATATTGGAAGGCCATTGATGTCACTGCTTTACAGCATGATCTCAACTTATTACCAGCACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCTTAGCTAGGGCAGTCTATTCAGATTCAGATGTATATATATTCGATGATCCTTTAAGTGCTCTCGATGCTCATGTTGCTCATGAGGTTTTCAAAAACTGTATAAAGGAAGCACTGGGAGGAAAAACAAGGGTTCTTGTCACCAACCAGCTACATCTTCTCCCTCAAGTGGATAAAATTATTCTCCTTAGTGACGGCATGATTAAAGAGCAGGGAACTTTTGAGGAGTTATCAAAGTGTGGGTATCTATTTCAGAGACTAATGGAAAATGCTGGGAAAATGGAACAACAATCAGAGAGTAATGAAGGTAGAGAGGACCATGTCGAGGTTAATGTTTCAACCTCGAGCAATGAGGCACTTGTTCAGATTCCAAACGACACAAGCTATGAGAAGAAGGGAAAATTACGCAAATCAGTGCTTGTTAAGCAAGAAGAGCGGGAGACTGGTGTGGTTAGCTTGAAAGTTTTGGCGAGGTATAAATCTGCATTAGGAGGCCTATGGGTAGTTTTCATACTCTTTGCCTGCTACACATTAACAGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTTTGGACAGATCAAGATTCCACTTCAGATTATAATCCAGTATATTTTCTTGTCGTCTATGCACTTTTCTCCTTTGGACAGGTTGCTGTAACACTTGCAAACTCTTATTGGTTGATCATTTCTAACCTCCGTGCTGCAAAAAGATTGCATGATGCAATGCTAGATAAAATACTTCGGGCCCCAATGGTATTCTTCCAAACTAATCCTGTTGGCCGCATAATTAACAGGTTTGCAAAAGACATGGGAGACATAGACACCATGGTTTCTACTTTGGTGAATCAGTTTATGGGGCAACTCTGGCAGCTACTTTCTACCTTTGTTCTCATTGGCACTGTGAGCACAATATCTCTGTGGGCTATAATGCCATTGCTGATCTTCTTTTATGGAGCTTATATATATTACCAGAGCACCGCTCGAGAAGTGAAGCGTTTGGATTCAATTACAAGATCTCCTGTTTATGCACACTTTGGAGAAGCGTTGAATGGTTTGGCAAGCATACGCGCTTACAAAGCATATGATAGAATGGCTCACATTAATGGAAAATTCATGGATAAAAATATCAGATTTACCCTTGTGAATATTAGTTCAAACCGTTGGCTCACCATAAGGTTAGAATCATTAGGAGGGCTCATGATTTGGTTCATAGCTACATTTGCTGTATTGCAAAATGGAAGATCTGAAAACCAGGCAGCATTTGCATCTACAATGGGCCTTCTTCTCAGTTATACTTTAAACATAACAAGTCTCTTGAGTGGTGTCCTGAGACAAGCAAGTAGAGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGGCACATACATTGATTTGGAAACTGAGGCTCCAAGAATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACATCTGGTTTAGTTGAGTTTGAGAATGTTGTCCTGAGTTACAGGCCTGAACTTCCTCCAGTCTTGCATGGACTGTCCTTTACGGTATTGCCAACCGAGAAGGTTGGGGTAGTTGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCTTTATTCCGTATCGTTGAGCTACAAAGTGGAAGAATCATTATTGATGGTTTTGACATTTCTATGTTTGGACTAGCAGATTTGCGAAGAGTTCTAACTATCATACCTCAATCACCAGTTCTTTTCTCTGGAACTGTTCGCTTCAATCTTGATCCATTTACTGAACACAATGATGCTGACATGTGGCAAGCTTTAGAAAGGGCACATTTGAAGGATGTAATAAGAAGAAATCCACTTGGTCTAGATGCACAGGTCTTGGAGGGTGGAGATAATTTTAGTGTTGGACAGAGGCAACTATTAAGTCTAGCCAGAGCATTGCTTCGAAGATCAAAGGTTCTTGTCCTGGACGAAGCGACTGCTGCTGTTGATGTTAGAACAGATGCTCTTATACAGAAAACCATCCGACAAGAGTTTCAGTCCTGCACAATGCTCATCATTGCACACAGACTAAATACAGTTATTGACTGCAATCGGATTCTATTGCTCGATTCTGGACGGGTCCTTGAGTATGACTCGCCGGACAAACTCTTATCGAATGAAGCAAGTGCATTCTACAAGATGGTTCAAAGTACAGGAGCTGCAAATGCTGAGTATTTATGTAGTTTAGTTTTTGGAAGGATTGTGAACAATTCTAATGAAGAAAACAAGGGACTTGAAAATCAAATGAGACAGTTAGCTTCTTCCAACTGGGCTGCTGCTACACAATGTGCTATAGCTGCAACCCTTTCTTCATTGCATCTTAACCTTCAAAGCCCAAATGAAACTAAAGACAACAAAGATTTCCTCGAAAAAACGAAGGACGCGTTGACAACACTTCAGGAAGTTCTGGAAGGGAAGCATGATGATGTTATACAACAGACACTTGTTAAACACAATGTTCCTACAGAAAGATGGTGGTCTACACTTCATCAATTAGTTGAAGGTTTGTCTGTCTTGATCAAGTTACATCCGAAAAACATTCAACAATTGGAACTTGATTTTGAAAGAAGGTCCTTTCACTGA 3972 0.3958 MQNQDPSWIGYIYAFSIFVGVSLGVLCEAQYFQNVMRVGFQLRSTLVAAIFRKSLRLTNEGRKKFSSGKLMNMITTDANALQQICQQLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLIVPLQTYVIAKMRKLTKEGLQQTDKRVGIMHEILAAMDTVKCYAWETSFQCRVQSIRDYELSWFRKAHLLNALNTFILNSIPVLVTVTSFGMFTLLGGELTPARAFTSLSLFTVLRFPLNMLPNLLSQVANANVSLQRLEELFLAEERNLKQNPPLVPGLPAISIKNGNFSWDAKAEKSTLSNINVEIPIGSLVAIVGGTGEGKTSLISTMIGELPLLNDGNAIIRGTVAYVPQISWIYNATVSCSLLMLLNIFTYFFCNKFKRNKYCNLLLNHIFLQVRENILFGSEFEYERYWKAIDVTALQHDLNLLPARDFTEIGERGVNISGGQKQRVSLARAVYSDSDVYIFDDPLSALDAHVAHEVFKNCIKEALGGKTRVLVTNQLHLLPQVDKIILLSDGMIKEQGTFEELSKCGYLFQRLMENAGKMEQQSESNEGREDHVEVNVSTSSNEALVQIPNDTSYEKKGKLRKSVLVKQEERETGVVSLKVLARYKSALGGLWVVFILFACYTLTEVLRISSSTWLSVWTDQDSTSDYNPVYFLVVYALFSFGQVAVTLANSYWLIISNLRAAKRLHDAMLDKILRAPMVFFQTNPVGRIINRFAKDMGDIDTMVSTLVNQFMGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYGAYIYYQSTAREVKRLDSITRSPVYAHFGEALNGLASIRAYKAYDRMAHINGKFMDKNIRFTLVNISSNRWLTIRLESLGGLMIWFIATFAVLQNGRSENQAAFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNAVERVGTYIDLETEAPRIIETNRPPPGWPTSGLVEFENVVLSYRPELPPVLHGLSFTVLPTEKVGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGFDISMFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFTEHNDADMWQALERAHLKDVIRRNPLGLDAQVLEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTVIDCNRILLLDSGRVLEYDSPDKLLSNEASAFYKMVQSTGAANAEYLCSLVFGRIVNNSNEENKGLENQMRQLASSNWAAATQCAIAATLSSLHLNLQSPNETKDNKDFLEKTKDALTTLQEVLEGKHDDVIQQTLVKHNVPTERWWSTLHQLVEGLSVLIKLHPKNIQQLELDFERRSFH 1323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03648 1323 Pfam ABC transporter 962 1110 IPR003439 GO:0005524
Arst10g03648 1323 Coils Coil 1198 1218 - -
Arst10g03648 1323 Gene3D - 928 1181 IPR027417 -
Arst10g03648 1323 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 945 1179 IPR003439 GO:0005524
Arst10g03648 1323 CDD ABCC_MRP_domain2 943 1163 - -
Arst10g03648 1323 ProSitePatterns ABC transporters family signature. 1082 1096 IPR017871 GO:0005524|GO:0016887
Arst10g03648 1323 SUPERFAMILY ABC transporter transmembrane region 8 265 IPR036640 GO:0005524|GO:0016020
Arst10g03648 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 275 534 IPR027417 -
Arst10g03648 1323 FunFam ABC transporter C family member 2 588 926 - -
Arst10g03648 1323 SUPERFAMILY ABC transporter transmembrane region 621 925 IPR036640 GO:0005524|GO:0016020
Arst10g03648 1323 Pfam ABC transporter 303 474 IPR003439 GO:0005524
Arst10g03648 1323 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 11 1186 - -
Arst10g03648 1323 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 11 1186 - -
Arst10g03648 1323 Pfam ABC transporter transmembrane region 624 876 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03648 1323 Pfam ABC transporter transmembrane region 3 241 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03648 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 625 908 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03648 1323 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 287 545 IPR003439 GO:0005524
Arst10g03648 1323 Gene3D ABC transporter type 1, transmembrane domain 586 926 IPR036640 GO:0005524|GO:0016020
Arst10g03648 1323 Gene3D ABC transporter type 1, transmembrane domain 1 268 IPR036640 GO:0005524|GO:0016020
Arst10g03648 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 253 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g03648 1323 CDD ABC_6TM_ABCC_D1 3 261 IPR044746 GO:0140359
Arst10g03648 1323 FunFam Multidrug resistance-associated protein member 4 929 1181 - -
Arst10g03648 1323 CDD ABCC_MRP_domain1 285 521 - -
Arst10g03648 1323 FunFam ABC transporter C family member 2 1 270 - -
Arst10g03648 1323 Gene3D - 269 570 IPR027417 -
Arst10g03648 1323 Coils Coil 244 264 - -
Arst10g03648 1323 ProSitePatterns ABC transporters family signature. 447 461 IPR017871 GO:0005524|GO:0016887
Arst10g03648 1323 CDD ABC_6TM_ABCC_D2 624 920 IPR044726 GO:0140359
Arst10g03648 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 936 1178 IPR027417 -
Arst10g03648 1323 SMART AAA_5 312 528 IPR003593 GO:0016887
Arst10g03648 1323 SMART AAA_5 971 1164 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03648 Arst-Chr10 104110570 104122220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03648 269 739 Calmodulin-binding Proteins AT2G36910 23.333 2.17e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03648 - - adu:107471837 2582.36