Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03640 ATGGCTGAAGAAGAAGTTCAAGTTGATCAAGTTCAAGTTAATCAACAACAACAAAGGGTAGTGATGATCCAAGATGCATCAAGAGAGGTTAATTTAGAAGCAATTATGATGGCCACCAAAAAGTTCTCTCTCAAATCCGGAGATCATCTCACAATTGTTCCAATTCTTGATTGGTTCAGTAGTCCTATGGGTTACATGATGAGAGTTGATTCCAATTACTTCATTTCAACCAACAAGAAAGTTATTGAGGAACATAGCAAGAGATGGTTAGATCTTCGTAACTCGGATCTCTTCGATCACTTCAAAAAGAATGAGATAAGATTCAAAGTAGAAGTGGTTGCTGGGCCTGCCACAGAAATTGCTTATAATGCTGTTAAAGAATTTCAGGCAACACGTTTGGTAGTTGACAAACGTATGCACAAAGAGATAAAGCACAACCTTGACAAATTCTCTTGTCGTCTCTATAAGATAAAAGGTAACAACTCTATTGAAAGGTTGAAGCCTACAAAATCAACAGATAATAATAATGGCTGCAAATCACATGGCAAAAGGCATGAAAATGCGGATGAACAATCTTCTCTAGGAATTAGGTCATCATCATCAAGCGACATGTTCTCTTCAAGTATTTACTCGAGCAGCACTGAAGCGTCAACATCGTCAAGTGTTGCAAGTTCGCGACAACTTGGACAACAAATAGACAACAACCTCGAACAACAACAACCAGATTTCAAAAACCCGGTTTGCAGCAAATGCAAGAACCGAAGACCGAGGCCGAGGTTGAAGATAGAGTTGAGTTACTCGGAGTTGTCGAAAGCGACAAACGGATTCTCTCAGAAGAATTTCTTGTCGGAAGGAGGATTCGGAGCGGTGTACAAAGGACAACTGAGTAACGGAATGAGGGTGGCCGTGAAGCAGCACAAGAACGCAAGCTTCCAAGGAGACAAGGAGTTTCAGTCGGAGGTTAGTGTTCTTAGAGAAGCAAGACATGAGAATGTTTTGATGCTTTTGGGTTCATGCTCCGAGGGACATAACAGGATTCTTGTTTATGAATATGTCTGCAATGGATCCCTTGCTCAACATCTCTCACAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAAAGTAGCAATTGGAGCTGCAAAGGGCTTGTTGTATTTACACTCCAAAAACATTATTCACAGAGATTTGCGACCAAACAATATTCTTATCACACATGATCATTATCCTCTGTTAGGCGATTTCGGGTTGGCAAGGATTCAAAATCAAGACTCGATATACTCAACAGAAGTCGTCGGAACGTTAGGATACTTGGCGCCGGAATATGCCGAATGTGGCAAAGTTTCAACCAAAACAGATGTTTACTCTTTTGGTGTTGTTCTTTTAGAGCTAATTACTGGAATGAGAACCATTGACAAAAGACTTGGAGGGAGAAGCCTTGTGGGATGGGCAAGGCCACTATTAAGAGAGAGGAATTATCCAGATTTAATTGATGAAAGGATTAAAGAAGATTATGATATCCATCAACTATTTTGGATGGTTCGTTTAGCTGAGAAATGTTTAAGCAGAGACCCTCAAAGAAGACTCAGTATGCTTGCGGTGGTTAATGCTTTGAATGGCATAGTGGAAGGAAGTACATGCATCAAAATAAAAGAATATTCCCCAGCAAGATCAGACTCATTCTATAGTGATTCTGAATCTGATAATGATGAAGATGAATTGCATGGTTATGAGTCTGAAGAAGTGTAA 1752 0.4013 MAEEEVQVDQVQVNQQQQRVVMIQDASREVNLEAIMMATKKFSLKSGDHLTIVPILDWFSSPMGYMMRVDSNYFISTNKKVIEEHSKRWLDLRNSDLFDHFKKNEIRFKVEVVAGPATEIAYNAVKEFQATRLVVDKRMHKEIKHNLDKFSCRLYKIKGNNSIERLKPTKSTDNNNGCKSHGKRHENADEQSSLGIRSSSSSDMFSSSIYSSSTEASTSSSVASSRQLGQQIDNNLEQQQPDFKNPVCSKCKNRRPRPRLKIELSYSELSKATNGFSQKNFLSEGGFGAVYKGQLSNGMRVAVKQHKNASFQGDKEFQSEVSVLREARHENVLMLLGSCSEGHNRILVYEYVCNGSLAQHLSQHSRSPLSWEDRIKVAIGAAKGLLYLHSKNIIHRDLRPNNILITHDHYPLLGDFGLARIQNQDSIYSTEVVGTLGYLAPEYAECGKVSTKTDVYSFGVVLLELITGMRTIDKRLGGRSLVGWARPLLRERNYPDLIDERIKEDYDIHQLFWMVRLAEKCLSRDPQRRLSMLAVVNALNGIVEGSTCIKIKEYSPARSDSFYSDSESDNDEDELHGYESEEV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03640 583 Gene3D Phosphorylase Kinase; domain 1 240 351 - -
Arst10g03640 583 MobiDBLite consensus disorder prediction 177 191 - -
Arst10g03640 583 CDD STKc_IRAK 282 542 - -
Arst10g03640 583 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 352 554 - -
Arst10g03640 583 SUPERFAMILY Protein kinase-like (PK-like) 263 550 IPR011009 -
Arst10g03640 583 Pfam Protein tyrosine and serine/threonine kinase 279 538 IPR001245 GO:0004672|GO:0006468
Arst10g03640 583 MobiDBLite consensus disorder prediction 163 202 - -
Arst10g03640 583 Gene3D Transferase(Phosphotransferase) domain 1 352 557 - -
Arst10g03640 583 SMART tyrkin_6 276 539 IPR020635 GO:0004713|GO:0006468
Arst10g03640 583 MobiDBLite consensus disorder prediction 557 583 - -
Arst10g03640 583 ProSiteProfiles Protein kinase domain profile. 276 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03640 583 FunFam Proline-rich receptor-like protein kinase PERK8 238 351 - -
Arst10g03640 583 PANTHER OS01G0750732 PROTEIN 165 558 - -
Arst10g03640 583 MobiDBLite consensus disorder prediction 566 583 - -
Arst10g03640 583 ProSitePatterns Tyrosine protein kinases specific active-site signature. 393 405 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03640 Arst-Chr10 104068118 104075016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03640 264 546 Trihelix Transcription Factor Family AT5G38560 45.424 5.08e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Arst10g03640 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03640 - - aip:107621236 683.715