Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03625 ATGTCTTCATTCAAATCATACGGCAAAGTTGATGAACATGACCAAATGTTACACCAAACCCAAATAAAAACCCGAAAGAGAATCATAATCATAAGCCTCTCCTCAATAATCCTCGTTGCTGTTGTCCTTGCTGCTGTTTTTGGAATTCTCAATAATTCTCGTGATCATAACTCACAACAAGATGGCAGTTCAGTGCTGGCGACGTCGGTGAAGGCGATTTGCGACGTGACATTGTACAAGGAATCATGTTACAGTAGCCTGAGCTCTGTTGTGAACTCATCAGCAGGGGAGGTTAAGCCAGAGGAGCTATTAAGGTTGTCCATTCAGGTGGCCTTAGAAGAAGTGTCAAGTGTTGTTAATAGGTATTTCTCTTCTGATAGTGGGGGGCATAATGGACATTTCCAAGGCTTGAATAATGATGGTAGGGCAAAGGAGGCTTTAGACAATTGTAGAGAGCTTTTGGATCTTGGAGTTGATCATCTTAATAACTCTCTGTCTTCTGTGGATTCCTCTTCCCTTTTTGACACCTTTGATGATCTTCAAACATGGTTAAGTGCTGCAGGTACATACCAACAAACTTGCACTGAAGGGTTGGATGAAGAAAAAGAATCACTAAAATTGAATGCAACAAACTACCTTAAAAACTCAACAGAGTTCACCAGTAACAGCCTGGCCATCATCACATGGATGAAGAAGGCGGCCGCAATGACCGTGAGCCGGCGGCGACGCTTGCTAAGTTCATCATTTCCAGAATGGGTTAGTTCCAAGGACAGGAAGTTACTTGGAAGCAAAGAAGAGAGTAATATTGTTGTGGCCAAAGATGGGAGTGGGAAATACAAGACAATATCGGAGGCATTGAAACATGTTCCAGAGAAGAGTAGTAAGAGGACAGTGATTTATGTGAAGAGAGGAGTTTACTATGAGAATGTGAGAGTTGAGAAGAACAAATGGAATGTGATGATGATTGGTGATGGCATGAATGCTACTATTGTTTCTGGTAGTCTTAACTTTGTTGATGGCACACCAACCTTTTCATCTGCTACTTTTGCTGTGTTTGGAAAGAATTTCATAGCAAGAGACATGGGATTTAGAAACACAGCTGGTCCACAGAAGCACCAAGCAGTGGCACTAATGACAACTGGGGATGAAGCTGTTTACTACAGATGCCAGATTGATGCATTTCAAGACACACTCTATGCTCATTCCAATCGCCAATTTTACAGAGAATGCAACATTTTTGGTACTGTTGATTTCATCTTTGGCAACTCTGCTGTTGTCATTCAAAATTGTAACATTTTTCCAAAGTTACCAATGCTTGGCCAGCAGAACACTATCACAGCACAAGGCAAAACTGATCCCAACATGAACACAGGTATCTCAATACAAAATTGCAAGATTTCAGGGTTTGGGAACTTGAGTTCTGTCCAAACATATTTGGGAAGGCCATGGAAGGATTACTCAACAACAGTGTTCATTAGATCCAAAATGGAAGCTTTAATTAACCCAAATGGATGGTTACCTTGGGTAGGAAACTCAGCACCAGACACCATCTATTATGCTGAATTTCAGAACTATGGACCAGGGGCTTCTACAGCAAATAGAGTCAAGTGGAAGGGCTTGAGAGCTATTTCTTCTAAACAAGCTAGCAAGTTTACAGTCAAGACTTTTCTTGGTGGCCAAAGATGGATTCCTGCATCTTCTGCTCCTTTTCAGTCTGATCTGTGA 1725 0.4157 MSSFKSYGKVDEHDQMLHQTQIKTRKRIIIISLSSIILVAVVLAAVFGILNNSRDHNSQQDGSSVLATSVKAICDVTLYKESCYSSLSSVVNSSAGEVKPEELLRLSIQVALEEVSSVVNRYFSSDSGGHNGHFQGLNNDGRAKEALDNCRELLDLGVDHLNNSLSSVDSSSLFDTFDDLQTWLSAAGTYQQTCTEGLDEEKESLKLNATNYLKNSTEFTSNSLAIITWMKKAAAMTVSRRRRLLSSSFPEWVSSKDRKLLGSKEESNIVVAKDGSGKYKTISEALKHVPEKSSKRTVIYVKRGVYYENVRVEKNKWNVMMIGDGMNATIVSGSLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTTGDEAVYYRCQIDAFQDTLYAHSNRQFYRECNIFGTVDFIFGNSAVVIQNCNIFPKLPMLGQQNTITAQGKTDPNMNTGISIQNCKISGFGNLSSVQTYLGRPWKDYSTTVFIRSKMEALINPNGWLPWVGNSAPDTIYYAEFQNYGPGASTANRVKWKGLRAISSKQASKFTVKTFLGGQRWIPASSAPFQSDL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03625 574 Pfam Plant invertase/pectin methylesterase inhibitor 69 226 IPR006501 GO:0004857
Arst10g03625 574 SUPERFAMILY Pectin lyase-like 267 571 IPR011050 -
Arst10g03625 574 FunFam Pectinesterase 66 231 - -
Arst10g03625 574 CDD PMEI-like_3 72 232 - -
Arst10g03625 574 SMART PMEI_2 65 226 IPR006501 GO:0004857
Arst10g03625 574 FunFam Pectinesterase 262 574 - -
Arst10g03625 574 Gene3D - 262 574 IPR012334 -
Arst10g03625 574 Pfam Pectinesterase 268 559 IPR000070 GO:0030599|GO:0042545
Arst10g03625 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 230 IPR035513 -
Arst10g03625 574 NCBIfam pectinesterase inhibitor domain 46 230 IPR006501 GO:0004857
Arst10g03625 574 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Arst10g03625 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 231 IPR035513 -
Arst10g03625 574 PANTHER PECTINESTERASE 35 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03625 Arst-Chr10 103986515 103991857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03625 7 574 Carbohydrate Esterase AT3G10710 54.514 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03625 - - gmx:100811152 766.533