Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03624 ATGTCATTTTTATCTATATCTTTATTTCTTTCTATTTTCTTCTTCCTTTTGTTCTTCACACCATCTTCTTCTTTATCTTTGTCGTCTTTTCCTTCTTCGTCTTCTTCTTCTGTTGCGTGCAAGTCGACATTATACCCTAAACTATGTCGTACCCTTCTCTCCACAATTCGAAACTCTCCTTTTGATCCGTACAGTTACGGCAAGTTTTCCATCAAACAAAGTCTCAAACAGGCCACAAAACTCGAAAAAGTCTTCAACGACTTTCTAAACCGCCACAATCACCAATCCAATAATAACTCTTCCTCTCTAAACAATGCTGAGGTCTCTGCAATCGTCGACTGCAGAGACCTCAACAAGCTCAACGTGGACTATCTTTTGTCCATATCCGCTGAGCTCAAATATGCTAATAACAATGATTATTATTATTCCAACGGCGCCGCGGAGCTCGTCGACAAGATCGAGAGCTATCTCAGCGCCGTGGCCACCAACCACGAGACGTGTTACGATGGGTTGGTGGCCACAAAAGGTGGGATAGGTAACGTGCTCGCGGCGTCGTTGAAGGGTGCCACAGAATTATACAGTGTGTCGCTTGGGTTGGTGAGTGTGGCTCTTGATAAGAACACGAAGAAGAATAATAATAAGACCCGCAAACATGGCCTTCCAACCAAGAACTTTATGGTTAGGGAGCCACTTGAGAAGCTCATTAAGCTTCTTCGAACAAAGTATAGTTGCAAGAAGAATTCAAATTGTAGCAGAAGCGAAAGGATTCTAAAAGAAAGCAAAAGCCAAGGGATTCTATTGAAAGATTTTGTGATAGTGAGCCATTATGAAGGGAGTGATAACTACAGTTCAATTGGAGAAGCCATTGCTGCTGCACCAAATAACACAAGGCCAGAAGATGGGTATTTTGTTGTGTATGTTAGAGAAGGGTATTATGAGGAATATGTTGTTGTTCCAAAAGAAAAGAAGAACATTTTGCTCATTGGAGATGGTATCAACAACACTATTATCACTGGCAATCATAGTTTCATTGATGGTTGGAGTACTTTCAATTCTTCTACCTTTGCTGTTAGCGGAGAAAGATTTATTGCGGTGGACATTACTTTCAGAAACACCGCCGGACCGGAAAAACACCAAGCCGTGGCTGTGCGAAACAACGCCGACCTCTCCACATTCTACCGTTGCAGCTTCGAAGGCTACCAAGACACGCTCTACGTCCACTCTCTCCGACAATTCTACCGAGAATGCCACATTTACGGCACCGTTGACTTTATCTTCGGCAACGCCGCTGTAGTCTTCCAAAGCTGCAACATCTACGCCAGAAATCCGATGGCCAATCAAAAGAATGCTGTGACTGCTCAGGGAAGAAACGATCCTAACATGAACACCGGAATCTCGATCCATAACTGCAGCATTAGTGCTGCACCGGACTTGAATACTTCGTCCACCGTGACCTACTTAGGTAGGCCATGGAAGGAGTATTCGAGGACGGTGTATTTGCAGTCTTATATTGGTGATCTCATAGAACCTTCTGGATGGTTGGAATGGAATGGAACAATTGGGTTGGATACTCTCTTTTATGGAGAATTCAATAATTATGGACCTGGTTCTAACACTAGTAATAGAGTTCATTGGCCTGGTTATGTGCTTTTGAATGCTACACAAGCTTCTAATTTTACTGTTCTTAATTTCACTTTGGGGAATACATGGCTTCCAGATACAGATATACCCTATACTGAAGGCTTGTTGAATTAG 1755 0.4279 MSFLSISLFLSIFFFLLFFTPSSSLSLSSFPSSSSSSVACKSTLYPKLCRTLLSTIRNSPFDPYSYGKFSIKQSLKQATKLEKVFNDFLNRHNHQSNNNSSSLNNAEVSAIVDCRDLNKLNVDYLLSISAELKYANNNDYYYSNGAAELVDKIESYLSAVATNHETCYDGLVATKGGIGNVLAASLKGATELYSVSLGLVSVALDKNTKKNNNKTRKHGLPTKNFMVREPLEKLIKLLRTKYSCKKNSNCSRSERILKESKSQGILLKDFVIVSHYEGSDNYSSIGEAIAAAPNNTRPEDGYFVVYVREGYYEEYVVVPKEKKNILLIGDGINNTIITGNHSFIDGWSTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECHIYGTVDFIFGNAAVVFQSCNIYARNPMANQKNAVTAQGRNDPNMNTGISIHNCSISAAPDLNTSSTVTYLGRPWKEYSRTVYLQSYIGDLIEPSGWLEWNGTIGLDTLFYGEFNNYGPGSNTSNRVHWPGYVLLNATQASNFTVLNFTLGNTWLPDTDIPYTEGLLN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03624 584 CDD PMEI-like_3 39 201 - -
Arst10g03624 584 NCBIfam pectinesterase inhibitor domain 6 196 IPR006501 GO:0004857
Arst10g03624 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 203 IPR035513 -
Arst10g03624 584 PANTHER PECTINESTERASE 15 572 - -
Arst10g03624 584 Pfam Pectinesterase 275 567 IPR000070 GO:0030599|GO:0042545
Arst10g03624 584 SUPERFAMILY Pectin lyase-like 270 581 IPR011050 -
Arst10g03624 584 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Arst10g03624 584 Pfam Plant invertase/pectin methylesterase inhibitor 39 198 IPR006501 GO:0004857
Arst10g03624 584 Gene3D - 268 582 IPR012334 -
Arst10g03624 584 FunFam Pectinesterase 266 582 - -
Arst10g03624 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 202 IPR035513 -
Arst10g03624 584 SMART PMEI_2 31 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03624 Arst-Chr10 103979621 103986780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03624 39 584 Carbohydrate Esterase AT3G10720 59.165 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03624 K01051 - gmx:100816503 830.861