Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03622 ATGGATATAGACCTTAGGTTACCTTCTGGTGAACATGATAAAGAGGATGAAGAAACAGCTACAATTGATAACATATTGGATGGTGAAGAAAAATTGAATAATGGAGCTATGGAGGGGAGAAATATGGTTGATCCTGGTATGGAGTTACAAGCTCTAAATGGTGGTGATTTGAATTCGCCCACACTTGATATGGTAATATTCAAGGAAGATACTAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGAGGCTTATTCATTCTACCAAGAATATGCTCGTTCAATGGGATTCAACACTGCAATACAGAATAGCCGACGCTCCAAAACATCAAGAGAATTCATAGATGCAAAGTTTGCTTGTTCTAGGTACGGAACAAAACGAGAATATGACAAATCGTTCAATCGACCACGTGCAAGACAGAGCAAGCCCGATTCTGAAAATTCAACCGGTCGAAGATCTTGTTCCAAGACTGACTGTAAAGCAAGTATGCACGTGAAAAGAAAACATGATGGAAAATGGGTTATACACAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTCAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCCAGACAGTTTGCTGAATACAAGACTGTGGTTGGTCTCAAGAATGAAAAGAATCCATTTGATAAAGGACGGAATTTGAGCCTTGAATCAGGAGACGCTAAACTCATGCTGGATTTTTTTGTACAGATGCAAAATATGAACTCTAACTTCTTTTATGCAGTTGATCTTGATGATGATCAAAGACTGAAAAATATTCTATGGATTGATGCTAAAAGTAGGCATGACTATACCAACTTTTGTGATGTAGTGTCATTTGATACCACTTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTATCAATTTATACTACTGGGGTGTGCCTTAATATCCGATGAAAGTCCCGCAACTTTTTCTTGGCTGATGCGGATGTGGCTGAAAGGAGTTGGTGGTCAAGTTCCAAAAGTGATGATTACTGAACATGACAAGACTTTGAAGTCAGTTATTGCAGATATATTCCCTAGTGCTTGTCATTGTGTCTCTTTATGGCATATTGTGGGTAAGATATCTGAAAATATGGCTCATGTAATTAAAAAACATGAGAAGTTTTTGGTGAAATTTGAAAAATGCATATACAGGTCATTGACCAGTGATGACTTTGAGAAGAGATGGTGGAAAATTGTTGATAGGTTTGAACTTCGAGAGGATGAATGCATGCAGTCACTATATGAAGATCGTAAGTTGTGGGCACCAACATTCATGAGGGATGTTTTCTTAGGTGGTATGTCTACTGTCCAACGATCGGAAAGTGTAAATTATTACTTTGACAAATATGTTCACAAGAAGACCTCTGTGCAAGATTTTGTTAAATTGTATGAAGCAATCTTGCAAGACAGGTACGAAGAGGAAGCCAAAGCAGATTCTGATACCTGGAATAAAGTAGCAACATTGAAAACTCCTTCACCGTTGGAGAAGAGTGTCGCAGGGGTTTACACGCATGCTGTATTCAAGAAGATTCAAGCTGAGGTTGTTGGTGCAGTTGCTTGTCATCCTAAAGCTGACAGACAAGATGAGACCACTATTATTCATCGGGTTCACGACATGCAATCAAATAAGGACTTCTTTGTTGTGGTGAATCAAGTAAAATCAGAATGGTCTTGTATATGTCGTTTATTTGAATATAGAGGCTATCTTTGTCGACACATATTGATTGTTCTGCAATATTCTGGCCATTCTGCAATCCCATCCCATTATATTTTGAAACGCTGGACCAAAGACGCAAAGGTCCGGAATATAATGGGAGAAGAGTCTGAACATATGCTGGCAAGGGTGCAACGATACAATGATTTATGTCAGCGAGCATTTAAACTGAGTGAAGAGGGATCTCTTTCACAAGAGAGTTACAGTATTGCAGTCCATGCACTGCACGAAGCACAAAAAAGTTGTGTGAGCGTTAATAATTCTGGCAAGAGTCCCATGGAAGTTGGTACATCAGTCACTCATGCTCAGCTTTCTACTGAAGAAGATACCCAAAGTAGAAATATGGGCAAGTCAAACAAAAAGAAAAATCCAGCTAAAAAGAAAAAGGTGAATGCTGAGGCTGAAATGTTGACTGTTGGAGCAATTGACAACATGCAACAAATGGTTTGTCCTCCCGCTGACAAGTTCAGCACAAGAGCTGCAGTAACCCTTGATGGCTATTACGGCACACAACAACAGGTGCAGGGAATGTTGAACTTAATGGGACCGCGAGATGATTTTTACGGGAATCAGCAGACTCTTCAGGGACTGGGACCAATAAGTTCAATACCAACAAGTCACGACGGTTATTATAGTGCGCACCAGGGCATGCCAAATCTGGCACAATTGGATTTTTTGCGAACAGGTTTCACATATGGCATCCGGGATGATCCGAATGTAAGAGCAGCGCAGTTGCATGAGGATCCGTCGAGGCATGCATGA 2544 0.4025 MDIDLRLPSGEHDKEDEETATIDNILDGEEKLNNGAMEGRNMVDPGMELQALNGGDLNSPTLDMVIFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQSKPDSENSTGRRSCSKTDCKASMHVKRKHDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLSLESGDAKLMLDFFVQMQNMNSNFFYAVDLDDDQRLKNILWIDAKSRHDYTNFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESPATFSWLMRMWLKGVGGQVPKVMITEHDKTLKSVIADIFPSACHCVSLWHIVGKISENMAHVIKKHEKFLVKFEKCIYRSLTSDDFEKRWWKIVDRFELREDECMQSLYEDRKLWAPTFMRDVFLGGMSTVQRSESVNYYFDKYVHKKTSVQDFVKLYEAILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGVYTHAVFKKIQAEVVGAVACHPKADRQDETTIIHRVHDMQSNKDFFVVVNQVKSEWSCICRLFEYRGYLCRHILIVLQYSGHSAIPSHYILKRWTKDAKVRNIMGEESEHMLARVQRYNDLCQRAFKLSEEGSLSQESYSIAVHALHEAQKSCVSVNNSGKSPMEVGTSVTHAQLSTEEDTQSRNMGKSNKKKNPAKKKKVNAEAEMLTVGAIDNMQQMVCPPADKFSTRAAVTLDGYYGTQQQVQGMLNLMGPRDDFYGNQQTLQGLGPISSIPTSHDGYYSAHQGMPNLAQLDFLRTGFTYGIRDDPNVRAAQLHEDPSRHA 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03622 847 SMART 26again6 579 606 IPR006564 GO:0008270
Arst10g03622 847 MobiDBLite consensus disorder prediction 686 724 - -
Arst10g03622 847 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Arst10g03622 847 Pfam MULE transposase domain 288 380 IPR018289 -
Arst10g03622 847 MobiDBLite consensus disorder prediction 132 164 - -
Arst10g03622 847 Pfam SWIM zinc finger 575 602 IPR007527 GO:0008270
Arst10g03622 847 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 677 IPR031052 GO:0006355
Arst10g03622 847 MobiDBLite consensus disorder prediction 686 706 - -
Arst10g03622 847 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03622 Arst-Chr10 103972496 103978600 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst10g03622 FAR1 1.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03622 - - gmx:100817034 1515.75