Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03620 ATGGATTCTTCAGAAGCATTGCCACCTCCACCACCAATCATTCCTGCAAATTTTGTTCCTACGAAAGCAGAATCCGGGAAAGCATCTAAGGCAGGGAAAGAAGAATCTCAGACAAAGTTCTTGCCTATGGTTAGAAGAGGTGTTGGGACCAAGGGACAGAAGATACAGCTGCTAAGTAACCATTTTAGAGTCGGTGTGGGCATAAAGGACAGTTTCTTCTTTCATTATAGTGTTGCTATGTCCTATGAGGATGGCAATCCCGTTGAAGCTAAGGGAATTGGCCGAAAGGTCATAGACAAAGTTTATGAAACATATGATGAACTGAAAAACAAGAATTTTGCATATGATGGGGAGAAAAGCTTGTTTACTCTTGGTTCTCTTAAAGAGAAAAAGATGGAATTCACTGTTGTGCTGGAGGATATTTCATCAAGGAGGGTTGGAACGCATGGTGATGGCCATGATAGCCCTTCTCATGGAGAGAAAAAGAGAATGAGGCGCCAATCTCAGTCCAAAACTATCAAGGCAGTGATCAGTTATGCAGCCAAAATCCCAATCCAAGCAATTGCAGATGCCTTGCGTGGACAAGATTCCGAGCACTTCCAGGAAGCATTGAGGGTCCTTGACATCATACTGAGGCAGCATGCAGCAAAGCAGGGCTGTCTCCTTGTCCGCCAATCCTTCTTCCACGACAATCCAAGGAATTATACTGACCTAGGAGGCGGTGTTCAAGGCTGCCGTGGTTTCCATTCAAGTTTCCGTCCTACTCAAGGAGGTTTATCTCTGAATATTGATGTGTCAACTACTATGGTTGTAAAGCCTGGCCCTGTACTGGACTTCCTTTGTGAGAATCAGAATGTGAAGAATCCAAATCTTATTGATTGGACCAAGGCAAAAAGAGTGCTGAAAAGCCTCAGAATCAAGGCTAATAATATTGAGTACAAAATCAGTGGACTCAGTGATAATCCTTGCAGGACTCAGAAGTTTTCAATGAAAGATGGGAAGGACTCGAATGGCGAACCACGGTTAATTGAAATCACAGTTTACAATTACTATAAACACCATAAGGGGATTGAATTGCCCTATTCTGCTGATTTTCCCTGCATCAATGTTGGGAAGCCAAAGCGCCCAACTTATTTTCCAGTGGAGCTATGCACCTTGATCTCATTGCAGCGGTATACCAAGGCATTGACAAATTTGCAAAGGGCTCAGTTAGTTGAGAAGTCAAGGCAAAAGCCCAATGAAAGGAAAGAAGCTTTGGCTGGTTCTTTAAGAAACAGCAGATATGGTAATGAGCCTATGCTTCGCTCTTCTGGGATTACCATTGAATCTGATTTTACTCGGGTTGAAGGTCGTATTCTGCAGCCCCCAAGACTTGTAGTAGGAAATGAGGAGAGCTTCATTCCAAGGGGTGGGCGCTGGAATTTCAACAATAAGAAACTAGTTAAACCTATGAGGCTTGAGCGCTGGGCCATTGTAAACTTCTCAGCTCGCTGTGACACACGTTTTTTGTGTAATACCATCAAGAAGTGTGCTGAAATGAAGGGGATTTACATAAACCCTCCATATCAAGTATTCGAAGAAGATGGTCGTTCAAGGCGCGATCCAGCACCTCTTAGGGTCGAGAGGATGTATCAACTTGTAAAGTCCAAGTTGCCTGGTCCCCCTCAACTTCTGTTGTGCATTCTTCCAGAGAGAAAGAATTCTGATATTTATGGACCTTGGAAAAGGAGAAGTCTTGCTGATGAAGGAGTTGCAACACAGTGTATTGCACCAACAAAAATTAATGATCAGTATATTACTAATGTTCTCCTGAAAATTAATGCAAAGCTTGGTGGAATGAATTCCTTCCTGTCAATGGAGTGTGCTCCTTCTATACCTTTACTTCATAATGAAGCTACCTTAATTCTTGGTATGGATGTATCTCATGGATCACCAGGCCGATCGGATGTACCATCTATTGCCGCGGTTGTGAGTTCAAGGAAATGGCCTTCAATATCCTGCTATAGAGCTGCAGTTCGCACTCAATCACCAAAAGTTGAGATGATTCAGTCTTTATTTAAGCCTGTTCCTTCCAATGATGGTACCGAAGATGAAGGTATCATCAGGGAGCTAATTATGGACTTCTATGAAACTTCAAATCAAAGGAAGCCTCAACAAATCATAATTTTCAGGGATGGAGTGAGTGAATCACAGTTCATCAAGGTCTTGAATGAAGAGTTAATTCCAATCATAGAGGCATGCAAATATCTTGATGAGAAATGGTCTCCCAAGTTCACTTTTATTGTTGCTCAGAAGAACCATCACACTAAGTTCTTTAAGGACAATGCACCAGATAATGTTCCACCAGGAACTGTTATTGACAGCCAAATCTGTCATCCTAAGAACAATGACTTTTATATGTGTTCTCATGCTGGCATGATTGGGACAACTCGACCTACTCATTACCAAGTTTTACATGATGAAATTGGGTTCTCTGCTGATGATTTGCAAGAAATAGTGCATTCTCTTTCTTATGTATACCAGAGGAGCACAACTGCCATATCAATAGTTGCTCCAGTTTGCTATGCTCACTTAGCAGCTGCCCAAATGGCACAATTTATCAAGTTTGATGAACTGTCTGAGACATCTTCTAGCCATGGTGGAACTACAATTTCTGGTGCAGTGCATGTTCCTCAGTTACCCCTTCTTCACCAAGATGTTGCCAATTCAATGTTCTTCTGTTAA 2724 0.4218 MDSSEALPPPPPIIPANFVPTKAESGKASKAGKEESQTKFLPMVRRGVGTKGQKIQLLSNHFRVGVGIKDSFFFHYSVAMSYEDGNPVEAKGIGRKVIDKVYETYDELKNKNFAYDGEKSLFTLGSLKEKKMEFTVVLEDISSRRVGTHGDGHDSPSHGEKKRMRRQSQSKTIKAVISYAAKIPIQAIADALRGQDSEHFQEALRVLDIILRQHAAKQGCLLVRQSFFHDNPRNYTDLGGGVQGCRGFHSSFRPTQGGLSLNIDVSTTMVVKPGPVLDFLCENQNVKNPNLIDWTKAKRVLKSLRIKANNIEYKISGLSDNPCRTQKFSMKDGKDSNGEPRLIEITVYNYYKHHKGIELPYSADFPCINVGKPKRPTYFPVELCTLISLQRYTKALTNLQRAQLVEKSRQKPNERKEALAGSLRNSRYGNEPMLRSSGITIESDFTRVEGRILQPPRLVVGNEESFIPRGGRWNFNNKKLVKPMRLERWAIVNFSARCDTRFLCNTIKKCAEMKGIYINPPYQVFEEDGRSRRDPAPLRVERMYQLVKSKLPGPPQLLLCILPERKNSDIYGPWKRRSLADEGVATQCIAPTKINDQYITNVLLKINAKLGGMNSFLSMECAPSIPLLHNEATLILGMDVSHGSPGRSDVPSIAAVVSSRKWPSISCYRAAVRTQSPKVEMIQSLFKPVPSNDGTEDEGIIRELIMDFYETSNQRKPQQIIIFRDGVSESQFIKVLNEELIPIIEACKYLDEKWSPKFTFIVAQKNHHTKFFKDNAPDNVPPGTVIDSQICHPKNNDFYMCSHAGMIGTTRPTHYQVLHDEIGFSADDLQEIVHSLSYVYQRSTTAISIVAPVCYAHLAAAQMAQFIKFDELSETSSSHGGTTISGAVHVPQLPLLHQDVANSMFFC 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03620 907 CDD PAZ_argonaute_like 273 387 - -
Arst10g03620 907 FunFam Protein argonaute 7 268 392 - -
Arst10g03620 907 Pfam PAZ domain 277 404 IPR003100 GO:0005515
Arst10g03620 907 MobiDBLite consensus disorder prediction 1 17 - -
Arst10g03620 907 MobiDBLite consensus disorder prediction 145 163 - -
Arst10g03620 907 MobiDBLite consensus disorder prediction 145 168 - -
Arst10g03620 907 SUPERFAMILY Ribonuclease H-like 541 866 IPR012337 -
Arst10g03620 907 ProSiteProfiles PAZ domain profile. 313 388 IPR003100 GO:0005515
Arst10g03620 907 SMART DUF1785_2 221 273 IPR014811 -
Arst10g03620 907 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 39 870 - -
Arst10g03620 907 FunFam Protein argonaute 3 625 907 - -
Arst10g03620 907 Pfam Piwi domain 558 868 IPR003165 GO:0003676
Arst10g03620 907 SUPERFAMILY PAZ domain 268 428 IPR036085 GO:0005515
Arst10g03620 907 Pfam Argonaute linker 2 domain 414 458 IPR032472 -
Arst10g03620 907 Gene3D paz domain 267 392 - -
Arst10g03620 907 MobiDBLite consensus disorder prediction 1 36 - -
Arst10g03620 907 SMART Piwi_a_2 557 868 IPR003165 GO:0003676
Arst10g03620 907 Pfam N-terminal domain of argonaute 53 211 IPR032474 -
Arst10g03620 907 Gene3D - 452 618 - -
Arst10g03620 907 ProSiteProfiles Piwi domain profile. 557 868 IPR003165 GO:0003676
Arst10g03620 907 CDD Piwi_ago-like 432 862 IPR045246 -
Arst10g03620 907 Gene3D - 625 907 IPR036397 GO:0003676
Arst10g03620 907 Pfam Argonaute linker 1 domain 223 271 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03620 Arst-Chr10 103955881 103961316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03620 38 907 Eukaryotic Initiation Factors Gene Family AT5G43810 35.502 6.47e-161 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03620 K11593 - pop:7486850 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03620 10 103955881 103961316 Arst10g03620 10 103955881 103961316 ECH
Arst1g03968 1 101190335 101200706 Arst10g03620 10 103955881 103961316 PCT